Spatial transcriptomics: SOP for Pathological Assessment and Region of Interest Selection using the NanoString GeoMx Digital Spatial Profiler (MD Anderson)
BRD ID: 3,271
Source: CIMAC-CIDC Network Tier: SOP Number of times downloaded: 47
Description
This document describes the procedure used by the MD Anderson Cancer Center at the University of Texas, a Cancer Immune Monitoring and Analysis Center (CIMAC) site, for the experimental design, pathological assessment, and selection of regions of interest for spatial profiling of slide-mounted tissue sections using NanoString’s GeoMx Digital Spatial Profiling (DSP) technology. The SOP is a product of the CIMAC and Cancer Immunologic Data Center Network (CIMAC-CIDC Network; https://dctd.cancer.gov/ResearchNetworks/cimacs_cidc_network.htm), a Cancer Moonshot Initiative.
Documents for Download
SOP_MDACC_GeoMX_PathAssesmentROI_090622_508_Final.pdf [Size: 1101 KB]Biospecimens
- Tissue - General
- Tissue - Not specified
Diagnoses
- Not specified
- Neoplastic - Not specified
Topics
- Platform-specific Methodology
Associated SOP Compendiums
- Platform-specific Methodology