GTEX-13JUV
|
41-50
|
Female
|
GTEX-13JUV-1326 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, several pieces have significant lymphoid component
|
Unacceptable
|
|
GTEX-13JVG
|
61-70
|
Male
|
GTEX-13JVG-2726 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, several include good lymphoid component, 3 include significant muscularis (not target)
|
Unacceptable
|
|
GTEX-13N11
|
41-50
|
Female
|
GTEX-13N11-1626 |
Ileum
|
PAXgene |
2
|
6 pieces; variably autolyzed mucosa with scattered lymphoid tissue, muscularis (not target) also present
|
Unacceptable
|
|
GTEX-13N1W
|
61-70
|
Male
|
GTEX-13N1W-2226 |
Ileum
|
PAXgene |
3
|
3 pieces; fragments of autolyzed mucosa with lymphoid component and smooth muscle
|
Unacceptable
|
|
GTEX-13N2G
|
51-60
|
Male
|
GTEX-13N2G-2026 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately to severely autolysed mucosa and scattered lymphoid nodules
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1826 |
Ileum
|
PAXgene |
3
|
6 pieces, ~10% tissue is lymphoid aggregates; rest autolyzed mucosa/muscularis/fat. Best reserved for TMA/ LCM
|
Acceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2026 |
Ileum
|
PAXgene |
3
|
6 pieces; severely autolyzed, no lymphoid nodules (target)
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; well sampled autolyzed mucosa, but no lymphoid nodules present
|
Unacceptable
|
|
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2426 |
Ileum
|
PAXgene |
1
|
5 pieces; 8 small lymphoid nodules in autolyzed mucosa; may be more suited for LCM
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2226 |
Ileum
|
PAXgene |
3
|
3 pieces, ~50-60% lymphoid aggregates; mucosal elements largely sloughed/autolyzed
|
Acceptable
|
|
GTEX-13NZA
|
61-70
|
Male
|
GTEX-13NZA-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with residual lymphoid aggregates
|
Acceptable
|
|
GTEX-13NZB
|
21-40
|
Male
|
GTEX-13NZB-1726 |
Ileum
|
PAXgene |
2
|
6 pieces; predominantly muscularis and fat (not target) with minimal residual autolyzed mucosa and rare lymphoid aggregate
|
Unacceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2826 |
Ileum
|
PAXgene |
3
|
6 pieces; ileal mucosa with insufficient lymphoid tissue for GTEx
|
Unacceptable
|
|
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-1026 |
Ileum
|
PAXgene |
1
|
6 pieces, 10% lymphoid aggregates, delineated, best for LCM or TMA studies
|
Acceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; no lymphoid tissue
|
Unacceptable
|
|
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2226 |
Ileum
|
PAXgene |
2
|
5 pieces; lymphoid tissue is generally diffusely distributed in mucosa
|
Acceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; lymphoid tissue [outlined] in each piece, but muscularis propria also present
|
Acceptable
|
|
GTEX-13O61
|
61-70
|
Male
|
GTEX-13O61-1326 |
Ileum
|
PAXgene |
1
|
4 pieces; abundant mucosal lymphoid tissue well dissected
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2426 |
Ileum
|
PAXgene |
3
|
4 pieces; glandular component of mucosa markedly autolyzed; residual lymphoid aggregates reasonably preserved, ~40% of tissue, rep delineated
|
Acceptable
|
|
GTEX-13OVI
|
61-70
|
Female
|
GTEX-13OVI-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, well-preserved, lymphoid aggregates ~10% total, best for LCM or TMA studies
|
Acceptable
|
|
GTEX-13OVJ
|
51-60
|
Female
|
GTEX-13OVJ-1626 |
Ileum
|
PAXgene |
2
|
5 pieces; moderatley to severely autolyzed mucosa with muscularis (not target), no significant lymphoid component (target)
|
Unacceptable
|
|
GTEX-13OVK
|
21-40
|
Male
|
GTEX-13OVK-0726 |
Ileum
|
PAXgene |
2
|
5 pieces; several lymphoid nodules in 3 pieces [marked]
|
Acceptable
|
|
GTEX-13OVL
|
41-50
|
Male
|
GTEX-13OVL-2326 |
Ileum
|
PAXgene |
1
|
6 pieces; numerous lymphoid nodules [outlined]
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2726 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosal epithelium totally autolyzed; ~50% tissue is residual lymphoid aggregates, rep delineated, fairly well preserved
|
Acceptable
|
|
GTEX-13OW6
|
51-60
|
Male
|
GTEX-13OW6-2326 |
Ileum
|
PAXgene |
2
|
2 pieces; moderate to severe autolysis of mucosa, no lymphoid nodules, muscularis also present (not target)
|
Unacceptable
|
|