GTEX-13JVG
|
61-70
|
Male
|
GTEX-13JVG-2826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa severely autolyzed
|
Unacceptable
|
|
GTEX-13N11
|
41-50
|
Female
|
GTEX-13N11-2026 |
Colon, transverse
|
PAXgene |
0
|
2 pieces; muscularis with some attached fat and fibrovascular tissue (20 and >50%)
|
Unacceptable
|
|
GTEX-13N1W
|
61-70
|
Male
|
GTEX-13N1W-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-13N2G
|
51-60
|
Male
|
GTEX-13N2G-2126 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mildly to moderately autolysed mucosa; 1 of 6 pieces with attached 10% of external fat
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucusa is badly autolyzed glandular elements but ~0.2mm thick, ~20% thickness
|
Acceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, autolyzed mucosa
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; glands autolyzed; muscle preserved; 2 have excessive perimuscular fat
|
Acceptable
|
|
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed; muscle intact
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces mucosa ~ 0.3mm, ~15-20% thickness, but markedly autolyzed glands, largely lamina propria remains
|
Acceptable
|
|
GTEX-13NZA
|
61-70
|
Male
|
GTEX-13NZA-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, up to 30% attached fat
|
Acceptable
|
|
GTEX-13NZB
|
21-40
|
Male
|
GTEX-13NZB-1826 |
Colon, transverse
|
PAXgene |
2
|
1 pieces; full thickness section with mucosal autolysis
|
Acceptable
|
|
GTEX-13O1R
|
61-70
|
Male
|
GTEX-13O1R-2726 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa only present: autolyzed; prominent melanosis coli (good for LCM)
|
Unacceptable
|
|
GTEX-13O21
|
51-60
|
Male
|
GTEX-13O21-2426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well presreved mucosa up to ~0.5mm thick
|
Acceptable
|
|
GTEX-13O3O
|
61-70
|
Female
|
GTEX-13O3O-2526 |
Colon, transverse
|
PAXgene |
3
|
4 pieces; mucosa autolyzed; muscularis intact
|
Acceptable
|
|
GTEX-13O3P
|
51-60
|
Male
|
GTEX-13O3P-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed; muscularis preserved
|
Acceptable
|
|
GTEX-13O3Q
|
51-60
|
Male
|
GTEX-13O3Q-2026 |
Colon, transverse
|
PAXgene |
3
|
5 pieces; mucosa autolyzed, muscularis preserved
|
Acceptable
|
|
GTEX-13O61
|
61-70
|
Male
|
GTEX-13O61-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; 5 full thickness, 1 without mucosa
|
Acceptable
|
|
GTEX-13OVG
|
61-70
|
Male
|
GTEX-13OVG-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa ~0.4mm, ~20% thickness, not well preserved, missing in some sections
|
Acceptable
|
|
GTEX-13OVH
|
61-70
|
Male
|
GTEX-13OVH-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, glandular component of mucosa markedly autolyzed, up to~0.3mm, ~15% thickness
|
Acceptable
|
|
GTEX-13OVI
|
61-70
|
Female
|
GTEX-13OVI-2026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa variably preserved but largely sloughed
|
Acceptable
|
|
GTEX-13OVJ
|
51-60
|
Female
|
GTEX-13OVJ-1726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections
|
Acceptable
|
|
GTEX-13OVK
|
21-40
|
Male
|
GTEX-13OVK-0826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces: 3 with & 3 without mucosa
|
Acceptable
|
|
GTEX-13OVL
|
41-50
|
Male
|
GTEX-13OVL-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa, thick fatty submucosa, preserved thin muscularis
|
Acceptable
|
|
GTEX-13OW5
|
61-70
|
Male
|
GTEX-13OW5-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa moderately-markedly autolyzed, ~0.3mm, ~10-15% thickness
|
Acceptable
|
|
GTEX-13OW6
|
51-60
|
Male
|
GTEX-13OW6-2126 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness sections, variably autolyzed mucosa, thin rim of adherent fat
|
Acceptable
|
|