GTEX-XQ8I
|
51-60
|
Male
|
GTEX-XQ8I-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x3mm; well dissected, no mucosa, some adipose
|
Acceptable
|
|
GTEX-XUJ4
|
61-70
|
Female
|
GTEX-XUJ4-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 11.5x6mm; ~90% target muscularis, good specimens, rep area delineated
|
Acceptable
|
|
GTEX-XUW1
|
51-60
|
Female
|
GTEX-XUW1-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4mm. Well trimmed muscularis except for up to 1 mm submucosa in all.
|
Acceptable
|
|
GTEX-XUZC
|
21-40
|
Female
|
GTEX-XUZC-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x6mm; all muscularis; good specimens
|
Acceptable
|
|
GTEX-XV7Q
|
41-50
|
Female
|
GTEX-XV7Q-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x5mm; generally all muscularis
|
Acceptable
|
|
GTEX-XXEK
|
51-60
|
Male
|
GTEX-XXEK-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x3mm; generally all muscularis, adherent fat/serosa on 3/6
|
Acceptable
|
|
GTEX-XYKS
|
61-70
|
Female
|
GTEX-XYKS-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 15x6mm; all 6 have full thickness of colon (target is muscle only)
|
Acceptable
|
|
GTEX-Y111
|
41-50
|
Male
|
GTEX-Y111-2126 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x5mm; 3 pieces contain muscularis only (target); 3 pieces contain mucosa (NOT the target) and muscularis
|
Acceptable
|
|
GTEX-Y114
|
41-50
|
Female
|
GTEX-Y114-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x4mm; generally all muscularis, a few have adherent fatty nubbins up to ~3mm thick, delineated
|
Acceptable
|
|
GTEX-Y3I4
|
51-60
|
Male
|
GTEX-Y3I4-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x5mm; mainly muscularis, adherent fatty nubbins on 5/6 up to 2 mm in d, rep ones delineated
|
Acceptable
|
|
GTEX-Y3IK
|
51-60
|
Female
|
GTEX-Y3IK-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x4mm. All have targeted muscularis. Two small extraneous mucosal pieces are marked.
|
Acceptable
|
|
GTEX-Y5LM
|
41-50
|
Female
|
GTEX-Y5LM-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 9x4mm; Well dissected: muscle mainly; no mucosa.
|
Acceptable
|
|
GTEX-Y5V5
|
61-70
|
Female
|
GTEX-Y5V5-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x3mm all colonic mucosa; 80-90% thickness is mucosa, moderately - severely autolyzed
|
Acceptable
|
|
GTEX-Y5V6
|
61-70
|
Male
|
GTEX-Y5V6-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x5mm; 3 of 6 have mucosa only; 3 of 6 have mucosa and muscularis
|
Acceptable
|
|
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8.4x3mm. All specimens have mucosa as well as the targeted muscularis propria. Mucosa=2, muscle=1.
|
Acceptable
|
|
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4.5mm;
|
Acceptable
|
|
GTEX-Y9LG
|
21-40
|
Male
|
GTEX-Y9LG-1326 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces. up to 8x5mm; All muscle (target) with adjacent submucosa. Neural tissue marked.
|
Acceptable
|
|
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x5mm; all muscularis, a few aliquots have ~1mm nubbins adherent fat, delineated
|
Acceptable
|
|
GTEX-YB5K
|
41-50
|
Female
|
GTEX-YB5K-1026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 10.5x5mm; All have mucosa, 3 with large amounts. TARGET is muscularis propria; discard mucosa.
|
Acceptable
|
|
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x2mm; trace adherent contaminant 'floater'mucosal fragments, all muscularis/serosalfat
|
Acceptable
|
|
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ranging from 7x4 to 8x5mm; <1% mucosa; mainly muscularis and serosa
|
Acceptable
|
|
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x2mm. Muscualris; a few nubbings of adherent fat, delineated, on 2
|
Acceptable
|
|
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; from 8x3 to 9x3mm; remnants of mucosa on 5/6 pieces
|
Acceptable
|
|
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, congested, unusually autolyzed
|
Acceptable
|
|
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 with small regions of residual mucosa (not fully trimmed).
|
Acceptable
|
|