GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 6x2mm; all muscle, no mucosa (good)
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x4mm; ~80% muscularis, rep delineated
|
Acceptable
|
|
GTEX-X4LF
|
51-60
|
Male
|
GTEX-X4LF-1226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4mm; `90+% muscle, trace mucosa, fat present
|
Acceptable
|
|
GTEX-X4XX
|
61-70
|
Male
|
GTEX-X4XX-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 9x2mm; All muscle (target). 3 pieces have up to 3x1 mm adipose on external surface.
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x1.5mm; all muscle (target)
|
Acceptable
|
|
GTEX-X585
|
51-60
|
Male
|
GTEX-X585-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 9x2mm; Well trimmed muscle. 10% subserosal adipose on 2 pieces.
|
Acceptable
|
|
GTEX-X5EB
|
41-50
|
Male
|
GTEX-X5EB-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x4mm; ~60% muscularis, rep. area delineated; rest is fat and mucosa
|
Acceptable
|
|
GTEX-X62O
|
51-60
|
Male
|
GTEX-X62O-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x3mm; mainly muscularis (rep area delineated); ~10-15% fat
|
Acceptable
|
|
GTEX-X8HC
|
51-60
|
Female
|
GTEX-X8HC-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x3mm; Well dissected without mucosa.
|
Acceptable
|
|
GTEX-XAJ8
|
41-50
|
Male
|
GTEX-XAJ8-0726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces up to ~8x3mm, all muscularis, excellent specimens
|
Acceptable
|
|
GTEX-XBEC
|
51-60
|
Male
|
GTEX-XBEC-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x3mm; ~60-70% muscle, delineated 9rep), rest is fat
|
Acceptable
|
|
GTEX-XBED
|
51-60
|
Male
|
GTEX-XBED-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x4mm; All pieces have mucosa and variable amounts of submucosal adipose. The sigmoid colon target is muscle only
|
Acceptable
|
|
GTEX-XBEW
|
41-50
|
Male
|
GTEX-XBEW-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x4mm; mainly muscularis (delineated): <10% total tissue is mucosa
|
Acceptable
|
|
GTEX-XGQ4
|
41-50
|
Male
|
GTEX-XGQ4-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces up to 10x4mm; Only ~25% muscle (2 aliquots, delineated( rest is fat
|
Acceptable
|
|
GTEX-XK95
|
41-50
|
Male
|
GTEX-XK95-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces. up to 8x1.5mm; 4/6 pieces have remnants of totally autolyzed glands (annotated)
|
Acceptable
|
|
GTEX-XLM4
|
61-70
|
Male
|
GTEX-XLM4-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x3mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-XMD1
|
61-70
|
Male
|
GTEX-XMD1-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces up to 8.5x3mm; all muscularis
|
Acceptable
|
|
GTEX-XMD2
|
61-70
|
Female
|
GTEX-XMD2-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 7.5x4mm; All muscle and some fibrous stroma (good)
|
Acceptable
|
|
GTEX-XMD3
|
51-60
|
Female
|
GTEX-XMD3-2926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces. up to 8x4mm; muscularis and submucosal stroma
|
Acceptable
|
|
GTEX-XMK1
|
41-50
|
Male
|
GTEX-XMK1-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 12x5mm; muscularis is ~25 % total, rest is fat/mucosa
|
Acceptable
|
|
GTEX-XOT4
|
61-70
|
Female
|
GTEX-XOT4-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 6x2mm; well dissected muscle
|
Acceptable
|
|
GTEX-XOTO
|
51-60
|
Male
|
GTEX-XOTO-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces. up to 8x7.5mm; generally all muscularis, focal pigmented histiolcytic aggregate (? tattoo)
|
Acceptable
|
|
GTEX-XPT6
|
21-40
|
Male
|
GTEX-XPT6-1326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~7x4mm, up to ~50% muscularis in 5 sections, one with no muscle
|
Acceptable
|
|
GTEX-XPVG
|
51-60
|
Male
|
GTEX-XPVG-1926 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x5mm; all have mucosa (autolysis=3) not target; 3 have (target) muscularis (autolysis=2)
|
Acceptable
|
|
GTEX-XQ3S
|
21-40
|
Male
|
GTEX-XQ3S-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x2mm; ~50% target muscularis present, rest is fat/stroma, rep target tissue delineated
|
Acceptable
|
|