GTEX-WHPG
|
41-50
|
Male
|
GTEX-WHPG-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 6x2.5mm; Well-sampled muscularis (without mucosa); good ganglion cells.
|
Acceptable
|
|
GTEX-WHSB
|
41-50
|
Male
|
GTEX-WHSB-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~6x3mm Only ~50% muscle, rep. areas delinieated, rest fat/mucosa
|
Acceptable
|
|
GTEX-WHSE
|
Other
|
Male
|
GTEX-WHSE-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces ~8x1.5mm. 80% muscularis propria. Badly autolyzed
|
Acceptable
|
|
GTEX-WHWD
|
51-60
|
Male
|
GTEX-WHWD-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 6x3mm; 1 of 6 has pericolonic adipose; others have well trimmed muscularis
|
Acceptable
|
|
GTEX-WI4N
|
41-50
|
Female
|
GTEX-WI4N-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~ 7x1.5mm, virtually all muscularis, clean speimens, but autolyzed
|
Acceptable
|
|
GTEX-WK11
|
51-60
|
Male
|
GTEX-WK11-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, up to 6.5x2mm; mucosa (unwanted) and muscle (target) in all pieces
|
Acceptable
|
|
GTEX-WL46
|
51-60
|
Male
|
GTEX-WL46-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces ~9x2mm, ~40-90% muscle, represntative foci delineated
|
Acceptable
|
|
GTEX-WOFL
|
61-70
|
Male
|
GTEX-WOFL-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x3.5mm; only 1 is free of mucosa, 5 have UNWANTED mucosa; musc=2, mucosa=3 (autolysis)
|
Acceptable
|
|
GTEX-WOFM
|
21-40
|
Male
|
GTEX-WOFM-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~7x5mm, 60-70% muscularis, rest is fat/mucosa
|
Acceptable
|
|
GTEX-WQUQ
|
61-70
|
Male
|
GTEX-WQUQ-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~7x2mm, ~90% muscularis, representative area delineated
|
Acceptable
|
|
GTEX-WRHK
|
21-40
|
Female
|
GTEX-WRHK-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 9x3mm; mainly muscle (our target) but 3 have foci of mucosa at one pole
|
Acceptable
|
|
GTEX-WRHU
|
51-60
|
Female
|
GTEX-WRHU-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces ~8x2.5mm; muscularis propria is ~90% of specimens, representative areas delineated
|
Acceptable
|
|
GTEX-WVJS
|
51-60
|
Male
|
GTEX-WVJS-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x4mm; all have full thickness (muscle target, mucosa not wanted)
|
Acceptable
|
|
GTEX-WVLH
|
51-60
|
Male
|
GTEX-WVLH-2726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~6x1mm, excllent specimens, all muscularis
|
Acceptable
|
|
GTEX-WWTW
|
51-60
|
Male
|
GTEX-WWTW-2626 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces ~7x2mm, 90% muscle, rep. areas delineated, badly autolyzed
|
Acceptable
|
|
GTEX-WWYW
|
51-60
|
Female
|
GTEX-WWYW-2626 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces ~8x2mm, 90% muscle, reprentative areas delineated
|
Acceptable
|
|
GTEX-WXYG
|
51-60
|
Female
|
GTEX-WXYG-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x3mm; all muscularis, good specimens
|
Acceptable
|
|
GTEX-WY7C
|
51-60
|
Male
|
GTEX-WY7C-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces ~6x4mm, all muscularis, good specimens
|
Acceptable
|
|
GTEX-WYBS
|
61-70
|
Female
|
GTEX-WYBS-2626 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, up to 8x1.5mm; mainly muscle less than 10% autlyzed mucosa
|
Acceptable
|
|
GTEX-WYJK
|
51-60
|
Male
|
GTEX-WYJK-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8x2mm; ~60% muscle, delineated
|
Acceptable
|
|
GTEX-WYVS
|
41-50
|
Female
|
GTEX-WYVS-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 10x5mm; all muscle, good specimens
|
Acceptable
|
|
GTEX-WZTO
|
41-50
|
Male
|
GTEX-WZTO-2626 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 7x2mm; 20-30% fat, mainly muscularis, trace autolyzed mucosa
|
Acceptable
|
|
GTEX-X15G
|
51-60
|
Female
|
GTEX-X15G-1526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 8.5x4mm; ~90% muscle/fat, rest is well preserved mucosa
|
Acceptable
|
|
GTEX-X261
|
51-60
|
Male
|
GTEX-X261-2126 |
Colon, sigmoid
|
PAXgene |
3
|
4 pieces, up to 6x2mm; mucosa=3;muscle=2; 2 with mucosa + muscle; 2 with muscle
|
Acceptable
|
|
GTEX-X3Y1
|
41-50
|
Male
|
GTEX-X3Y1-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, up to 7x3mm; well dissected muscularis
|
Acceptable
|
|