GTEX-1MA7W
|
21-40
|
Female
|
GTEX-1MA7W-0826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~target muscularis delineated, ~50% of tissue, rest is 'contaminant' serosa/mucosa
|
Acceptable
|
|
GTEX-1MCC2
|
21-40
|
Female
|
GTEX-1MCC2-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with trace of adherent serosa
|
Acceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-1226 |
Colon, sigmoid
|
PAXgene |
1
|
4 pieces; large amount of partly autolyzed lymphoid tissue and submucosa in 2 of 4 pieces; muscle intact
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-1526 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are muscularis only, 3 are full thickness (mucosa not target)
|
Unacceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-2326 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1MJK3
|
21-40
|
Male
|
GTEX-1MJK3-1026 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; untrimmed mucosa comprises up to 10% of tissues
|
Acceptable
|
|
GTEX-1MUQO
|
61-70
|
Male
|
GTEX-1MUQO-2226 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1N2DV
|
41-50
|
Male
|
GTEX-1N2DV-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1N2DW
|
51-60
|
Male
|
GTEX-1N2DW-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis and attached rim of serosa
|
Acceptable
|
|
GTEX-1N2EE
|
61-70
|
Male
|
GTEX-1N2EE-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; confirmed target muscularis. Adherent fat up to ~0.8mm
|
Acceptable
|
|
GTEX-1N2EF
|
61-70
|
Male
|
GTEX-1N2EF-1726 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; portion of autolyzed mucosa in 1 piece [circled]; variable amounts of submucosa in 5 pieces up to 25% area
|
Acceptable
|
|
GTEX-1N5O9
|
61-70
|
Male
|
GTEX-1N5O9-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis; three pieces with attached fat up to 1mm
|
Acceptable
|
|
GTEX-1N7R6
|
21-40
|
Female
|
GTEX-1N7R6-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
|
GTEX-1NHNU
|
51-60
|
Male
|
GTEX-1NHNU-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; all have muscularis, but mucosa present on half; LCM
|
Unacceptable
|
|
GTEX-1NSGN
|
51-60
|
Male
|
GTEX-1NSGN-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; confirmed target muscularis; two pieces with attached serosa (outlined)
|
Acceptable
|
|
GTEX-1NUQO
|
21-40
|
Female
|
GTEX-1NUQO-2326 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of good representation of target muscularis
|
Unacceptable
|
|
GTEX-1NV5F
|
61-70
|
Female
|
GTEX-1NV5F-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscularis propria
|
Acceptable
|
|
GTEX-1NV8Z
|
61-70
|
Male
|
GTEX-1NV8Z-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, adherent serosa/fat up to 1mm nubbins
|
Acceptable
|
|
GTEX-1O97I
|
61-70
|
Male
|
GTEX-1O97I-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 5 of 6 contain autolyzed mucosa and abundant submucosa; muscularis propria comprises 30 to 80%
|
Acceptable
|
|
GTEX-1O9I2
|
51-60
|
Male
|
GTEX-1O9I2-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, advanced autolysis
|
Acceptable
|
|
GTEX-1OFPY
|
61-70
|
Male
|
GTEX-1OFPY-1226 |
Colon, sigmoid
|
PAXgene |
0
|
6 pieces; well dissected muscularis propria with up to 10% submucosal stroma
|
Acceptable
|
|
GTEX-1OJC3
|
21-40
|
Male
|
GTEX-1OJC3-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with ~1mm attached serosa
|
Acceptable
|
|
GTEX-1OJC4
|
51-60
|
Female
|
GTEX-1OJC4-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, 4 include strips of largely autolyzed mucosa
|
Acceptable
|
|