GTEX-13N1W
|
61-70
|
Male
|
GTEX-13N1W-2226 |
Ileum
|
PAXgene |
3
|
3 pieces; fragments of autolyzed mucosa with lymphoid component and smooth muscle
|
Unacceptable
|
|
GTEX-13N1W
|
61-70
|
Male
|
GTEX-13N1W-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and preserved muscularis
|
Acceptable
|
|
GTEX-13N1W
|
61-70
|
Male
|
GTEX-13N1W-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; 5 of 6 pieces include autolyzed mucosa (not target)
|
Unacceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1226 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion/autolysis
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1426 |
Stomach
|
PAXgene |
3
|
6 pieces, a few have up to ~0.6mm mucosal layer but all badly autolyzed
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces, marked autolysis/saponfication; Islets not well preserved
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1826 |
Ileum
|
PAXgene |
3
|
6 pieces, ~10% tissue is lymphoid aggregates; rest autolyzed mucosa/muscularis/fat. Best reserved for TMA/ LCM
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucusa is badly autolyzed glandular elements but ~0.2mm thick, ~20% thickness
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-2026 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, muscularis and autolyzing mucosa, intramural diverticuli present; rep delineated
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-2126 |
Prostate
|
PAXgene |
3
|
2 pieces, glandular elements with near-total autolysis, sloughed into lumina
|
Acceptable
|
|
GTEX-13NYB
|
41-50
|
Male
|
GTEX-13NYB-2226 |
Testis
|
PAXgene |
3
|
2 pieces, tubular cells badly autolyzed, sloughing into lumen
|
Acceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2026 |
Ileum
|
PAXgene |
3
|
6 pieces; severely autolyzed, no lymphoid nodules (target)
|
Unacceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2226 |
Stomach
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and muscularis
|
Unacceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, autolyzed mucosa
|
Unacceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2526 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; muscularis (target) and severely autolyzed mucosa (not target)
|
Unacceptable
|
|
GTEX-13NYC
|
61-70
|
Male
|
GTEX-13NYC-2726 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis; 30% and 10% internal fat; thick walled vessel
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2326 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; totally autolyzed epithelium
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2526 |
Stomach
|
PAXgene |
3
|
6 pieces; totally autolyzed mucosa, no muscularis sampled
|
Unacceptable
|
|
GTEX-13NYS
|
61-70
|
Male
|
GTEX-13NYS-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; well sampled autolyzed mucosa, but no lymphoid nodules present
|
Unacceptable
|
|
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2226 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces; no sign of active or chronic lesions
|
Acceptable
|
|
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; glands severely autolyzed; muscle slightly to moderately autolyzed
|
Acceptable
|
|
GTEX-13NZ8
|
61-70
|
Female
|
GTEX-13NZ8-2926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed; muscle intact
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-1426 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion/autolysis
|
Acceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-1526 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces, mucosa present, 20-30% thickness, autolyzed, gastric type, incorrect target
|
Unacceptable
|
|
GTEX-13NZ9
|
51-60
|
Male
|
GTEX-13NZ9-1726 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, mucosa markedly and unusually autolyzed, sloughing, ~ 0.1mm residual, with chronic esophagitis
|
Acceptable
|
|