GTEX-11ONC
|
61-70
|
Male
|
GTEX-11ONC-1826 |
Ileum
|
PAXgene |
2
|
6 pieces; mostly muscularis (not target) minimal mucosa, virtually no lymphoid tissue
|
Unacceptable
|
 |
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-0626 |
Coronary artery
|
PAXgene |
0
|
2 pieces, predominantly fat with portion of vein, not artery
|
Unacceptable
|
 |
GTEX-11P81
|
21-40
|
Female
|
GTEX-11P81-1226 |
Ileum
|
PAXgene |
2
|
4 pieces, muscularis and autolyzed mucosa with inadequate lymphoid tissue
|
Unacceptable
|
 |
GTEX-11PRG
|
51-60
|
Male
|
GTEX-11PRG-2526 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, attached moderately autolyzed gastric mucosa, not correct target
|
Unacceptable
|
 |
GTEX-11TT1
|
21-40
|
Male
|
GTEX-11TT1-0826 |
Ileum
|
PAXgene |
0
|
6 pieces, minimal lymphoid tissue
|
Unacceptable
|
 |
GTEX-11TTK
|
61-70
|
Female
|
GTEX-11TTK-1426 |
Liver
|
PAXgene |
2
|
2 pieces; severe central vascular congestion with liver cell atrophy [c/w heart failure]; only thin rim of periportal liver cells remain intact;
|
Unacceptable
|
 |
GTEX-11TTK
|
61-70
|
Female
|
GTEX-11TTK-2126 |
Pancreas
|
PAXgene |
3
|
2 pieces; too autolyzed for GTEx
|
Unacceptable
|
 |
GTEX-11TTK
|
61-70
|
Female
|
GTEX-11TTK-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; too autolyzed & too little lymphoid tissue
|
Unacceptable
|
 |
GTEX-11UD1
|
41-50
|
Female
|
GTEX-11UD1-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, severe medial calcific sclerosis and plaque
|
Unacceptable
|
 |
GTEX-11VI4
|
41-50
|
Female
|
GTEX-11VI4-0926 |
Uterus
|
PAXgene |
1
|
2 pieces; endo and ectocervix, not uterus
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0126 |
Thyroid gland
|
PAXgene |
1
|
3 pieces, favor medullary carcinoma, involving the entire specimen (up to 8mm in greatest dimension)
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0426 |
Atrial appendage
|
PAXgene |
1
|
3 pieces, one piece is predominantly fibrous/fat
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0826 |
Spleen
|
PAXgene |
1
|
2 pieces, >75% is fibrous trabeculae/vessels
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, epithelium predominantly sloughed, some submucosal glands and dilated ducts
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1226 |
Gastroesophageal junction
|
PAXgene |
2
|
7 pieces, muscularis (target) and squamous and gastric mucosa (not target, incorrect region)
|
Unacceptable
|
 |
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-2026 |
Ileum
|
PAXgene |
3
|
6 pieces, entirely autolyzed mucosa with limited lymphoid tissue and muscularis (not target)
|
Unacceptable
|
 |
GTEX-11WQK
|
51-60
|
Male
|
GTEX-11WQK-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces, not artery, unknown
|
Unacceptable
|
 |
GTEX-11WQK
|
51-60
|
Male
|
GTEX-11WQK-1726 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, badly autolyzed, no mucosa
|
Unacceptable
|
 |
GTEX-11WQK
|
51-60
|
Male
|
GTEX-11WQK-2026 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, all adipose tissue, unknown provenance
|
Unacceptable
|
 |
GTEX-11ZTT
|
61-70
|
Female
|
GTEX-11ZTT-0226 |
Adrenal glands
|
PAXgene |
0
|
2 pieces, adipose tissue, no adrenal
|
Unacceptable
|
 |
GTEX-11ZTT
|
61-70
|
Female
|
GTEX-11ZTT-1426 |
Ileum
|
PAXgene |
1
|
6 pieces, fragmented mucosa with only minimal lymphoid tissue
|
Unacceptable
|
 |
GTEX-11ZTT
|
61-70
|
Female
|
GTEX-11ZTT-2026 |
Vagina
|
PAXgene |
0
|
6 pieces, numerous sebaceous glands indicating vulva was sampled
|
Unacceptable
|
 |
GTEX-11ZUS
|
21-40
|
Male
|
GTEX-11ZUS-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces, severely autolyzed
|
Unacceptable
|
 |
GTEX-11ZUS
|
21-40
|
Male
|
GTEX-11ZUS-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, severely autolyzed mucosa with focal prominent lymphoid tissue and fragments of muscularis (not target)
|
Unacceptable
|
 |
GTEX-11ZVC
|
51-60
|
Female
|
GTEX-11ZVC-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; only 2 of 6 are muscularis, 4 are mucosa and submucosa; only useful for TMA or laser capture [annotated]
|
Unacceptable
|
 |