GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0626 |
Testis
|
PAXgene |
1
|
2 pieces; atrophy with hyalinized tubules, increased Leydig cells
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0726 |
Prostate
|
PAXgene |
2
|
2 pieces; nodular hyperplasia
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; mild lymphocytic thyroiditis with 1mm Hurthle cell lesion
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-0926 |
Aorta
|
PAXgene |
1
|
6 pieces; severe atherosclerosis, collection of lymphocytes within adventitia, two pieces show defects within the wall (? secondary to processing)
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 includes up to 15% fat
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; large cuff of adipose tissue (up to 2.2mm), obliterated by plaque
|
Unacceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1226 |
Heart
|
PAXgene |
1
|
2 pieces; interstitial fibrosis
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1326 |
Lung
|
PAXgene |
1
|
2 pieces; congestion, edema, 1 piece includes portion of pleura (not target), some fibrosis
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1426 |
Liver
|
PAXgene |
2
|
2 pieces; includes portion of capsule (not target), central congestion
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1526 |
Pancreas
|
PAXgene |
2
|
2 pieces; includes ~10% fat and larger vessel, interstitial fibrosis
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, few with small attachment of fat
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis with some residual adventitia
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; pseudodiverticulosis, several clusters of submucosal glands
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; both with ~40% attached fat
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2026 |
Stomach
|
PAXgene |
2
|
6 pieces; mucosa is poorly preserved, muscularis better preserved
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2126 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; all include portion of medulla (not target), arterio and arteriolonephrosclerosis, hyalinized glomeruli, chronic interstitial inflammation
|
Unacceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat, central defects
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa, good lymphoid component (but partially autolyzed), muscularis (not target)
|
Unacceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed, muscularis better preserved
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2526 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; predominantly muscularis, some residual submucosa/mucosa
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2626 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; essentially well trimmed, small attachment of fat, 1 piece
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; 70-80% fat, remainder is fibrocollagenous tissue with scattered small ducts/vessels/nerve
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2826 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adenohypophysis, neurohypophysis
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-2926 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; portion of attached meninges
|
Acceptable
|
 |
GTEX-1J8Q2
|
61-70
|
Male
|
GTEX-1J8Q2-3026 |
Brain - cortex
|
PAXgene |
2
|
4 pieces (fragmented); focus of many corpora amylacea
|
Acceptable
|
 |