GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue ~50% with fibrovascular component ~50%
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; ~5% external/internal (periadnexal) fat
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 5% attached fat
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; circumferential flat atherosclerotic plaque with insignificant luminal compromise; lumen open; >0.5 mm attached adventitia
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0726 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; one piece contains ~10% internal fat (outlined)
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces of thyroid tissue; interstitial fibrosis
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-0926 |
Lung
|
PAXgene |
1
|
2 pieces of pulmonary tissue; mild to moderate autolysis; one section contains bronchus with cartilage (outlined) and a few bronchioles; congestion
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1026 |
Aorta
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis; marked atherosclerosis with slerotic, ulcerated plaque and superficial dissection (outlined) and fresh thrombosis (arrows); up to 0.7mm attached adventitia
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; mild to moderated autolysis; eccentric atherosclerotic plaque (arrows) and large calcification (outlined) with 50% luminal compromise
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1326 |
Heart
|
PAXgene |
1
|
2 pieces; interstitial fibrosis with focal scarring (outlined); ? focal edema of fibers and eosinophilia (arrows) suggestive of early infarction
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1426 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; well preserved stratified squamous epithelium ~0.4um thick and muscularis mucosae
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1526 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; essentially well trimmed target muscularis; trace rim of serosa on one section (outlined)
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1726 |
Stomach
|
PAXgene |
2
|
6 pieces; mild to moderate autolysis; gastric mucosa and muscularis
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderate to severe focal autolysis of adrenal cortex, medulla; rim of adherent fat
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; one composed of fibrotic stroma and ductal structures and other composed of adipose tissue and fibrotic stroma with ductal structures suggestive of gynecomastoid stromal and glandular hyperplasia
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2026 |
Liver
|
PAXgene |
1
|
2 pieces; expanded portal areas with bile duct proliferation, lymphocytic infiltration and fibrosis with bridging consistent with cirrhosis; congestion; one piece contains large and thick walled vessels (outlined)
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2126 |
Spleen
|
PAXgene |
2
|
2 pieces; congestion; one piece contains large, thick walled vessles (outlined)
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2226 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis; advanced arterio and arteriolonephrosclerosis and diabetic glomerulopathy; majority of glomeruli hyalinized; chronic interstitial inflammation; end stage renal disease
|
Unacceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2326 |
Pancreas
|
PAXgene |
2
|
2 pieces; interstitial fibrosis with microlobulation; rare Langerhans islets (rep outlined); thick walled vessels (arrows)
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderate to severe mucosal autolysis; congestion; preserved muscularis
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis with partial rim of submucosa/serosa
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and too few of residual lymphoid aggregates to warrant analysis (<10%)
|
Unacceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2726 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue; one piece contains larger vessel (arrow)
|
Acceptable
|
 |