GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1426 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; all with both mucosa & muscularis propria
|
Unacceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1526 |
Stomach
|
PAXgene |
1
|
6 pieces; muscularis only, no mucosa
|
Unacceptable
|
|
GTEX-1JKYR
|
21-40
|
Male
|
GTEX-1JKYR-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; muscle only, no mucosa
|
Unacceptable
|
|
GTEX-1JMOU
|
61-70
|
Female
|
GTEX-1JMOU-2126 |
Ileum
|
PAXgene |
2
|
6 pieces, muscularis, trace autolyzed mucosa. Target lymphoid aggregates less than 1% of tissue
|
Unacceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-0626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; muscularis with significant admixture of smooth and skeletal muscle suggesting sampling of upper esophagus
|
Unacceptable
|
|
GTEX-1JMPY
|
21-40
|
Male
|
GTEX-1JMPY-1126 |
Ileum
|
PAXgene |
1
|
6 pieces; predominantly mucosa with few strips of residual muscularis (not target) and only rare lymphoid aggregate
|
Unacceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat comprises only 30%; remainder is largely fibrovascular
|
Unacceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-0826 |
Liver
|
PAXgene |
1
|
2 pieces; severe vascular congestion and fibrosis consistent with cardiac cirrhosis
|
Unacceptable
|
|
GTEX-1JMPZ
|
21-40
|
Male
|
GTEX-1JMPZ-2126 |
Omentum
|
PAXgene |
1
|
multiple fragmented pieces containing small amounts of lobulated atrophic adipose tissue in a highly vascularized stroma; there is no normal adipose tissue
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0426 |
Adrenal glands
|
PAXgene |
1
|
2 pieces; fat only
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; fat only
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-0726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; essentially no intact epithelium
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis and significant residual mucosa (not target)
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; autolyzing mucosa and muscularis (not target) with minimal lymphoid tissue
|
Unacceptable
|
|
GTEX-1JMQI
|
51-60
|
Male
|
GTEX-1JMQI-1926 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; not nerve; vessels/fat/fibrous and lymphoid tissue
|
Unacceptable
|
|
GTEX-1JMQJ
|
51-60
|
Male
|
GTEX-1JMQJ-2726 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa with small portion of muscularis (not target), lymphoid tissue insufficient for analysis
|
Unacceptable
|
|
GTEX-1JMQK
|
61-70
|
Male
|
GTEX-1JMQK-0826 |
Lung
|
PAXgene |
2
|
2 pieces; widespread bronchopneumonia; no unaffected lung tissue
|
Unacceptable
|
|
GTEX-1JMQL
|
51-60
|
Female
|
GTEX-1JMQL-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces,largely medulla. Marked thyroidization, chronic nepritis
|
Unacceptable
|
|
GTEX-1JMQL
|
51-60
|
Female
|
GTEX-1JMQL-2626 |
Ileum
|
PAXgene |
3
|
6 pieces autolyzed mucosal stroma, trace lymphoid aggregates
|
Unacceptable
|
|
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces; excessive autolysis; most areas not recognizable
|
Unacceptable
|
|
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2026 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, no muscularis present
|
Unacceptable
|
|
GTEX-1JN6P
|
61-70
|
Male
|
GTEX-1JN6P-2226 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; epithelium autolyzed and largely sloughed
|
Unacceptable
|
|
GTEX-1JN76
|
21-40
|
Female
|
GTEX-1JN76-0726 |
Liver
|
PAXgene |
1
|
2 pieces; extensive central necrosis consistent with chemical/medication injury or prolonged hypotension
|
Unacceptable
|
|
GTEX-1K2DA
|
51-60
|
Male
|
GTEX-1K2DA-0426 |
Lung
|
PAXgene |
1
|
2 pieces; organizing bronchopneumonia, bronchial smooth muscle hypertrophy and increased mucosal goblet cells (suggestive of asthma)
|
Unacceptable
|
|
GTEX-1K2DA
|
51-60
|
Male
|
GTEX-1K2DA-1426 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with only focal lymphoid tissue (1 of 6 pieces)
|
Unacceptable
|
|