GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, present, ~10% "contaminat completely autolyzed mucosa
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2626 |
Stomach
|
PAXgene |
3
|
6 pieces, target mucosa up to ~0.5mm but with advanced autolysis/sloughing
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, target mucosa dimly present, <0.1mm, laregly autolyzed/sloughed
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, autolyzed mucosa; minimal target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~90% target muscularis (rep delineated); ~10% auolyzing "contaminant" mucosa
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; no abnormalities
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, all adenohypophysis
|
Acceptable
|
 |
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-3226 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; no abnormalities
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat; squamous epithelium is ~30 microns
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascial elements are ~5-10% of tissue, rep delineated
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, trace atherosis; prominent Monckeberg sclerosis, rep delineated
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat/vascular elements, rep delineated; foci of scarring/resolved myositis, rep. encircled
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, regressive changes, micronodular goitre
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0726 |
Lung
|
PAXgene |
1
|
2 pieces, moderate edema, congestion
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0826 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, moderate interstitial dermal fat, rep delineated; squamous epithelium is ~30-40 microns
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-0926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces fibroadipose elements, gynecomastoid stromal hyerplasia; trace ductal elements, encircled
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1026 |
Heart
|
PAXgene |
1
|
2 pieces, severe interstitial fibrosis/chronic ischemic changes, remote infarcts, rep delineated
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1126 |
Liver
|
PAXgene |
1
|
2 pieces, mild chronic steatohepatitis, mild early bridging fibrosis, moderate passive congestion
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1226 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~0.3mm
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.6mm, 30-40% thickness. Submucosal mucus gland delineated. Few foci with more moderate autolysis, early sloughing, encircled
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, adherent nubbins of fat up to ~1.5mm
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1626 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5-10% fascia/vascular elements
|
Acceptable
|
 |
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-1726 |
Spleen
|
PAXgene |
1
|
2 pieces, moderate congestion
|
Acceptable
|
 |