GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; artery not nerve; well trimmed
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; vein and stroma, not nerve
|
Unacceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; vein collected, not artery
|
Unacceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0726 |
Heart
|
PAXgene |
1
|
2 pieces; no lesions
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0826 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; 40% & 5% fat content
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0926 |
Aorta
|
PAXgene |
0
|
6 pieces; well trimmed, plaque-free; very good mural morphology
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1026 |
Lung
|
PAXgene |
1
|
2 pieces; extensive bronchopneumonia
|
Unacceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed muscularis
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; several foci of chronic esophagitis [circled] with lymphoid infiltrates
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1326 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed muscularis
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1426 |
Stomach
|
PAXgene |
1
|
6 pieces; 4 of 6 have well trimmed muscularis; 2 have 30% perimuscular stroma; none have mucosa; may be useful for comparison with other mucosa-free samples
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1526 |
Spleen
|
PAXgene |
1
|
2 pieces; slight congestion
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces: 3 with & 3 without mucosa; LCM
|
Unacceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1726 |
Omentum
|
PAXgene |
0
|
2 pieces; <5% fibrous content
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces: none have mucosa; could be used to compare muscularis with other mucosa-free samples
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; 1 piece has abundant lymphoid-rich mucosa [outlined]; all have full thickness muscular wall
|
Unacceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-2026 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; large number of hair follicles sampled
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-2126 |
Prostate
|
PAXgene |
1
|
2 pieces: larger is mostly muscular with peripheral ducts; smaller has more acinar tissue, but still mostly muscle
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-2226 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
 |
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-2326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; adipose tissue with 10% fibrous content in 1; no obvious mammary ducts
|
Acceptable
|
 |
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~35-40 microns
|
Acceptable
|
 |
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, !0% tendinous insertion (delineated)/interstitial fat
|
Acceptable
|
 |
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
 |
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~5-10% fascia, rep delineated
|
Acceptable
|
 |
GTEX-1IDJH
|
61-70
|
Male
|
GTEX-1IDJH-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, minimal atherosis; prominent Monckeberg sclerosis (rep delineated). Rim of adherent fibrous tissue up to ~1mm
|
Acceptable
|
 |