GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0326 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 50-60% is fat/fibrous/blood
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces; predominantly fat with lesser portion of vein, smaller artery
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0626 |
Lung
|
PAXgene |
1
|
2 pieces; numerous macrophages, areas of collapse, fibrosis, and dilated spaces, some carryover (circled)
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0726 |
Liver
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 1cm below), steatosis
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0826 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; patchy eosinophilic squamous surface, chronic inflammation, and hyperplasia c/w reflux, fragment of mucosa of GE junction
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; predominantly muscularis, some residual submucosa/fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; mature fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1326 |
Pancreas
|
PAXgene |
1
|
2 pieces; trivial attached fat, some fibrosis /atrophy
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair-bearing skin with from ~5-15% internal and attached fat
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1526 |
Ileum
|
PAXgene |
1
|
6 pieces; 3 full thickness colon, 3 muscularis only
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; 3 are muscularis only, 3 are full thickness (mucosa not target)
|
Unacceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; mature fat with some central defects, <10% fibrous component
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-1926 |
Artery - tibial
|
PAXgene |
1
|
3 pieces; 2 pieces are artery with focal intimal thickening, 3rd piece is fat/fibrous/nerve
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2026 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve with partial rim of fat comprising 25-40% of the specimen
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-2226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes up to ~20% attached fat, epidermis measures 33 microns
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0126 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; atheromatous plaque with mural organizing thrombosis narrowing the lumen by ~50% and 75% (arrows); ~1mm of attached adventitia
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0226 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; trace rim of adherent fat
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; one piece with trace of internal/external fat (arrows)
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0426 |
Skin, leg
|
PAXgene |
1
|
6 pieces; 0 to 10% internal (periadnexal fat) and one piece with ~20% external fat (outlined); ~36 micron thick epidermis
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0526 |
Adipose tissue
|
PAXgene |
1
|
3 pieces; two pieces of mature adipose tissue with ~15% fibrovascular component and nerves (arrow); the third piece represents deep dermis and fat (outlined)
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0626 |
Liver
|
PAXgene |
1
|
2 pieces; mild microvesicular steatosis; marked congestion
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1MJK2
|
51-60
|
Male
|
GTEX-1MJK2-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue with prominent congested fibrovascular component and larger vessel wall (outlined)
|
Acceptable
|
|