GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; well dissected muscle; a 0.7mm mucosal contaminant (carry-over) labeled
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1726 |
Stomach
|
PAXgene |
1
|
6 pieces; 3 have mucosa/submucosa only; 1 has muscularis only; 2 have full thickness (mucosa & muscularis)
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1826 |
Testis
|
PAXgene |
2
|
3 pieces; spermatogenesis with reduced number of mature sperm; colon mucosa/submucosa (4 sq mm, labeled) attached to 1 piece
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; scattered ducts (arrowed) in fibrofatty tissue
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2026 |
Pancreas
|
PAXgene |
1
|
2 pieces; PanIN 1A lesions in 1 labeled focus. 5% internal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2126 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; 60% lip and fat on 1 piece, 10% on other (both labeled)
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2226 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed, hairless; <5% dermal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2326 |
Skin, leg
|
PAXgene |
1
|
6 pieces; well trimmed; up to 10% dermal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 1 piece contains hair and sweat glands (labeled)
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; well trimmed nerve with 20% internal fat
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; thin fibrous intimal plaques; 20% & 40% fibrofatty external stroma
|
Acceptable
|
 |
GTEX-1AX9K
|
51-60
|
Male
|
GTEX-1AX9K-2726 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; 10% internal fat
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congested, portion of capsule present
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0226 |
Thyroid gland
|
PAXgene |
0
|
2 pieces; one piece includes ~30% fat and connective tissue, attached portion of large vessel in second piece
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0326 |
Aorta
|
PAXgene |
1
|
6 pieces; some atherosclerosis
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0426 |
Heart
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0526 |
Atrial appendage
|
PAXgene |
0
|
2 pieces; one piece includes ~10% fat
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; calcific atherosclerosis, abundant attached fat (30 and 80%)
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0726 |
Lung
|
PAXgene |
1
|
2 pieces; includes pleura (not target region), many pulmonary macrophages, some collapse/fibrosis/larger vessels present
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0826 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; few pieces include up to 20% attached fat
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-0926 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; predominantly fat with small portion of stroma, focal macrophages/reactive changes/fat necrosis
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-1026 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present/reduced
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-1126 |
Omentum
|
PAXgene |
1
|
2 pieces; incomplete section (?poor fixation)
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces; 10-20% attached fat
|
Acceptable
|
 |
GTEX-1AYCT
|
51-60
|
Male
|
GTEX-1AYCT-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; 3 include mucosa and muscularis, 3 are mucosa only
|
Acceptable
|
 |