GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis, few with small attachment of fat/nerve
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1326 |
Spleen
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1426 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; target muscularis
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; rare atrophic fiber
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; interacinar and interlobar fibrosis, atrophy, islets with variable replacement by amyloid
|
Unacceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; relatively well trimmed with minimal attached fat
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; fragmented, medial calcific sclerosis, atherosclerosis
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1926 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately autolyzed with hemorrhage, 1 piece is cortex, 2nd is largely medulla and suggestive of medullary hyperplasia
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2026 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; tubular atrophy and interstitial fibrosis, occasional sclerotic glomeruli, arteriosclerosis
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2126 |
Prostate
|
PAXgene |
1
|
2 pieces; 1 piece is all stroma, 2nd is 80% stroma with some glands with sloughing epithelium, focal skeletal muscle
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2226 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with only focal lymphoid tissue and portion of muscularis (not target)
|
Unacceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness, mucosa is autolyzed with focal hemorrhage, muscularis is better preserved
|
Unacceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; target muscularis, some residual submucosa and lymphoid aggregates
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; full thickness, mucosa is largely autolyzed
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2626 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is reduced/absent
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2726 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces; mild to moderate autolysis
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2826 |
Brain - cortex
|
PAXgene |
2
|
4 pieces; questionable increase in glial cells
|
Acceptable
|
 |
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adenohypophysis (70%) and neurohypophysis (30%)
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0226 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% fascia/vascular elements
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0326 |
Lung
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0426 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~0.4mm
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0526 |
Pancreas
|
PAXgene |
1
|
2 pieces, Islets well-preserved, rep encircled
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~20-25% of thickness
|
Acceptable
|
 |
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |