GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-2526 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; 1 has more neurons than the other
|
Acceptable
|
|
GTEX-1MCQQ
|
51-60
|
Male
|
GTEX-1MCQQ-2626 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; lacks features of cerebellum
|
Unacceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0226 |
Spleen
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0326 |
Pancreas
|
PAXgene |
1
|
2 pieces; plentiful islets
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0426 |
Aorta
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0526 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; includes up to ~5-10% attached/internal fat, hair bearing sklin
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; nodularity with few colloid cysts
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-0926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis, but 3 pieces and detached fragment include squamous mucosa
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-1126 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections, well preserved, foveolar surface partly sloughed
|
Acceptable
|
|
GTEX-1MCYP
|
21-40
|
Female
|
GTEX-1MCYP-1626 |
Ileum
|
PAXgene |
1
|
6 pieces; preserved with excellent lymphoid component, pigmentation and reactive follicles
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-0826 |
Lung
|
PAXgene |
1
|
2 pieces, mild congestion; moderate atelectasis; well-preserved intermediate bronchus, delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1226 |
Pancreas
|
PAXgene |
1
|
2 pieces, rare but well-preserved Islets; rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1326 |
Omentum
|
PAXgene |
1
|
2 pieces, ~5% fascia/vascular elements; rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1426 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present; appears reduced
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1526 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; adherent serosal fat up to ~4mm nubbins, rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa up to ~0.35mm, ~25% thickness. Rare mucus glands present; rep delineated
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-1826 |
Stomach
|
PAXgene |
1
|
6 pieces, well-preserved mucosa up to ~1.4mm, ~80% of thickness
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2226 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
|
GTEX-1MGNQ
|
41-50
|
Male
|
GTEX-1MGNQ-2326 |
Ileum
|
PAXgene |
1
|
4 pieces, ~5-10% target lymphoid aggregates, rep delineated
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; 1 piece includes portion of capsule (target region is 5mm below capsule)
|
Acceptable
|
|
GTEX-1MJIX
|
41-50
|
Male
|
GTEX-1MJIX-0226 |
Aorta
|
PAXgene |
1
|
6 pieces; some carryover noted
|
Acceptable
|
|