GTEX-1IKOH
|
61-70
|
Female
|
GTEX-1IKOH-2626 |
Colon, transverse
|
PAXgene |
3
|
6 piece, glandular mucosa completely autolyzed; lamina prpria remnants are ~0.25mm
|
Acceptable
|
 |
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and too few of residual lymphoid aggregates to warrant analysis (<10%)
|
Unacceptable
|
 |
GTEX-1IL2V
|
61-70
|
Male
|
GTEX-1IL2V-2326 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, squamous mucosa partially sloughing, poorly preserved, few submucosal mucus glands delineated
|
Acceptable
|
 |
GTEX-1IL2V
|
61-70
|
Male
|
GTEX-1IL2V-2426 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced mucosal autolysis, <1% target lymphoid aggregates remain
|
Unacceptable
|
 |
GTEX-1IL2V
|
61-70
|
Male
|
GTEX-1IL2V-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.25mm, glandular elements sloughing
|
Acceptable
|
 |
GTEX-1IOXB
|
51-60
|
Male
|
GTEX-1IOXB-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; totally autolyzed
|
Unacceptable
|
 |
GTEX-1IOXB
|
51-60
|
Male
|
GTEX-1IOXB-2026 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; totally autolyzed
|
Unacceptable
|
 |
GTEX-1IOXB
|
51-60
|
Male
|
GTEX-1IOXB-2126 |
Ileum
|
PAXgene |
3
|
6 pieces: abundant but autolyzed lymphoid tissue; muscularis present on 3 pieces
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1026 |
Thyroid gland
|
PAXgene |
3
|
2 pieces; fibrosis and hyalinization, multinodular, moderate to severe autolysis
|
Acceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces; severely autolyzed pancreas, not adrenal
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-1926 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis , one piece contain ~15% external fat (outlined)
|
Unacceptable
|
 |
GTEX-1IY9M
|
61-70
|
Male
|
GTEX-1IY9M-2126 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; severly autolyzed mucosa and preserved muscularis
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-2626 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.7mm but with modereate-severe autolysis, partially sloughing
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucoa up to ~0.25mm, glandular elements completely autolyzed, partially sloughing
|
Acceptable
|
 |
GTEX-1J1OQ
|
41-50
|
Female
|
GTEX-1J1OQ-2926 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa with advanced autolysis, gland elements sloughed, target lymphoid elements are ~20% residual tissue
|
Acceptable
|
 |
GTEX-1J8EW
|
51-60
|
Female
|
GTEX-1J8EW-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa severely autolyzed; muscularis intact
|
Acceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-1626 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces, target mucosa largely sloughed, trace residual up to ~50 microns
|
Acceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-1726 |
Stomach
|
PAXgene |
3
|
6 pieces, autolyzed mucosa up to ~1mm, ~30% of thickness, glandular mucosa largely degraded
|
Acceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present; tubules with advanced autolysis
|
Acceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2226 |
Ileum
|
PAXgene |
3
|
6 pieces, only with trace residual lymphoid elements
|
Unacceptable
|
 |
GTEX-1J8JJ
|
61-70
|
Female
|
GTEX-1J8JJ-2326 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.3mm, but with advanced autolysis, loss of glandular elements
|
Acceptable
|
 |
GTEX-1JJ6O
|
61-70
|
Male
|
GTEX-1JJ6O-1126 |
Pancreas
|
PAXgene |
3
|
2 pieces; small component of fat, mild fibrosis, moderate to severe autolysis
|
Unacceptable
|
 |
GTEX-1JJE9
|
61-70
|
Male
|
GTEX-1JJE9-0426 |
Prostate
|
PAXgene |
3
|
2 pieces; 1 piece has 60% glands which are totally autolyzed; other is largely intact smooth muscle stroma with 10% autolyzed glands
|
Acceptable
|
 |
GTEX-1JJE9
|
61-70
|
Male
|
GTEX-1JJE9-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces; large areas of complete autolysis
|
Unacceptable
|
 |
GTEX-1JJE9
|
61-70
|
Male
|
GTEX-1JJE9-2026 |
Stomach
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa; limited amount of muscularis
|
Unacceptable
|
 |