GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2026 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, glomeruli present, tubules moderately autolysis
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.8mm, 25-30% thickness
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis6
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2426 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, muscularis, sloughed mucosa. Insufficient target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.3mm, autolysis advanced, partially sloughed
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2726 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces, minimal target muscularis, mainly autolyzed mucosa and stroma
|
Unacceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2826 |
Prostate
|
PAXgene |
2
|
2 pieces, glands with moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1ICLY
|
51-60
|
Male
|
GTEX-1ICLY-2926 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis is present
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; sweat glands appear atrophic; 5 of 6 pieces are well trimmed; <5% dermal fat
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 5% stromal content; portion of large blood vessel occupies 20%
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; some adnexal glands are moderately autolyzed; well trimmed; 10% dermal fat
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue with no obvious mammary ducts
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0526 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; slightly nodular;, generally poor preservation, focally bordering on severe autolysis
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; focal atrophy with fiber drop-out and to 20% fat content
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0726 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; up to 10% fat content; small arteries hyalinized
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0826 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; heavily calcified; small amount of residual arterial wall present
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-0926 |
Lung
|
PAXgene |
2
|
2 pieces; areas of moderate fibrosis, alveolar edema and macrophages; large vein occupies 20% of 1 piece
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1026 |
Heart
|
PAXgene |
1
|
2 pieces; patchy scars (largest circled) & muscle drop-out consistent with old ischemia; thin layer of pericardial fat
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1126 |
Aorta
|
PAXgene |
1
|
6 pieces; fiber (elastic?) drop out; minimal plaque
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1226 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces; 4 of 6 pieces have moderate amount of external fibrofatty stroma
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1326 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces; completely sloughed epithelium; moderately autolyzed muscularis mucosae and submucosa with mucous glands
|
Unacceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscle layer
|
Acceptable
|
 |
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1526 |
Liver
|
PAXgene |
2
|
2 pieces; severe (50%) perilobular fibrosis consistent with cardiac cirrhosis; moderate macrovesicular steatosis
|
Unacceptable
|
 |