GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1926 |
Ileum
|
PAXgene |
1
|
6 pieces; 1 piece has abundant lymphoid-rich mucosa [outlined]; all have full thickness muscular wall
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0426 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; skeletal muscle with profound atrophy (c/w history of disuse), portion of tendon
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-0826 |
Esophagus - mucosa
|
PAXgene |
0
|
6 pieces; all include significant component of muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; artery represents ~10-15% of 1 piece, rest is extraneous tissues (fibrous/fat/vein/nerve)
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1826 |
Vagina
|
PAXgene |
1
|
6 pieces (fragmented); mostly stroma with skeletal muscle, only 2 pieces include partially denuded epithelium
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-1926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; minor representation of muscularis, predominantly submucosa
|
Unacceptable
|
|
GTEX-1IDJI
|
51-60
|
Female
|
GTEX-1IDJI-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; partially autolyzed mucosa, only scattered lymphoid aggregates, and muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDJU
|
61-70
|
Female
|
GTEX-1IDJU-2126 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant well preserved lymphoid tissue, but all have muscularis propria; LCM
|
Unacceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-1026 |
Coronary artery
|
PAXgene |
1
|
2 pieces, minimal target artery with ~60-70% occlusive atherosis(delineated), mainly epicaridal fat
|
Unacceptable
|
|
GTEX-1IDJV
|
51-60
|
Male
|
GTEX-1IDJV-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, autolyzed mucosa; minimal target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1IE54
|
21-40
|
Female
|
GTEX-1IE54-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; predominantly muscularis, some with attached submucosa/adventitia
|
Unacceptable
|
|
GTEX-1IE54
|
21-40
|
Female
|
GTEX-1IE54-1826 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; congested, partially autolyzed gastric mucosa
|
Unacceptable
|
|
GTEX-1IE54
|
21-40
|
Female
|
GTEX-1IE54-1926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; muscularis
|
Unacceptable
|
|
GTEX-1IE54
|
21-40
|
Female
|
GTEX-1IE54-2026 |
Stomach
|
PAXgene |
3
|
6 pieces; moderate to severe mucosal autolysis
|
Unacceptable
|
|
GTEX-1IE54
|
21-40
|
Female
|
GTEX-1IE54-2326 |
Ileum
|
PAXgene |
2
|
6 pieces; full thickness (muscularis not target), mucosa partially autolyzed, only 2 pieces include good lymphoid component (insufficient)
|
Unacceptable
|
|
GTEX-1IGQW
|
61-70
|
Male
|
GTEX-1IGQW-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, only trace target lymphoid aggregates in mucosa with advanced autolysis
|
Unacceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-1826 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, ~90% fat, 10% autolyzed cortex
|
Unacceptable
|
|
GTEX-1IKJJ
|
61-70
|
Male
|
GTEX-1IKJJ-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, mucosa with advance autolysis, devoid of lymphoid aggregates
|
Unacceptable
|
|
GTEX-1IKK5
|
61-70
|
Male
|
GTEX-1IKK5-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; admixture with skeletal muscle [outlined]; specimen taken too proximally
|
Unacceptable
|
|
GTEX-1IKK5
|
61-70
|
Male
|
GTEX-1IKK5-2226 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; follicular neoplasm with possible capsular invasion suspicious for follicular carcinoma
|
Unacceptable
|
|
GTEX-1IKK5
|
61-70
|
Male
|
GTEX-1IKK5-2626 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa autolyzed, plentiful lymphoid tissue; muscularis present on all; LCM
|
Unacceptable
|
|
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2226 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis; advanced arterio and arteriolonephrosclerosis and diabetic glomerulopathy; majority of glomeruli hyalinized; chronic interstitial inflammation; end stage renal disease
|
Unacceptable
|
|
GTEX-1IL2U
|
61-70
|
Male
|
GTEX-1IL2U-2626 |
Ileum
|
PAXgene |
3
|
6 pieces; autolyzed mucosa and too few of residual lymphoid aggregates to warrant analysis (<10%)
|
Unacceptable
|
|
GTEX-1IL2V
|
61-70
|
Male
|
GTEX-1IL2V-2426 |
Ileum
|
PAXgene |
3
|
6 pieces, advanced mucosal autolysis, <1% target lymphoid aggregates remain
|
Unacceptable
|
|
GTEX-1IOXB
|
51-60
|
Male
|
GTEX-1IOXB-1426 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; 4 pieces are medulla, 2 are cortex [arrowed]; no active or chronic lesions;
|
Unacceptable
|
|