GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2226 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa autolyzed, muscle intact but partially autolyzed (2)
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2326 |
Ovary
|
PAXgene |
1
|
2 pieces: 1 has corpora albicantia occupying 25% space; other has fibrovascular core occupying 30%
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2426 |
Uterus
|
PAXgene |
1
|
2 pieces; mostly myometrium; atrophic endometrium delineated
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2526 |
Vagina
|
PAXgene |
1
|
6 pieces; partly sloughed atrophic epithelium
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolyzed; muscularis intact [1]
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2726 |
Ileum
|
PAXgene |
3
|
4 pieces; too few lymphoid cells in autolyzed mucosa; 2 nodules circled for possible LCM
|
Unacceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; foci of fibrovascular stroma occupy up to 10%
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-2926 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 10 & 20% dermal fat in 2 pieces
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-3026 |
Brain - cerebellum
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-3126 |
Brain - cortex
|
PAXgene |
2
|
4 pieces
|
Acceptable
|
 |
GTEX-17JCI
|
61-70
|
Female
|
GTEX-17JCI-3226 |
Pituitary gland
|
PAXgene |
1
|
1 piece; autolysis varies from 1 to 2 in anterior lobe; posterior lobe = 1
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0126 |
Prostate
|
PAXgene |
1
|
2 pieces, hyerplasia, several 1-2 mm microfoci of Adenocarcinoma, 3+3=6, ensquared
|
Unacceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0226 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0326 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, cortex, ~10% adherent fat/vascular elements, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0426 |
Omentum
|
PAXgene |
1
|
2 pieces, ~15-20% fascia/vascular elements, rep delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0526 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis, adherent fascia/fat up to ~1mm
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, adherent fat is ~20% total specimen, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0726 |
Coronary artery
|
PAXgene |
1
|
2 pieces, correct target but abundant adherent fat/myocardium(delineated) are ~80% of specimen
|
Unacceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0826 |
Heart
|
PAXgene |
1
|
2 pieces, minimal mild ischemic changes/interstitial fibrosis
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-0926 |
Lung
|
PAXgene |
1
|
2 pieces diffuse chronic congestion/edema, moderate-marked
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1026 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities, ~2mm nubbin of fat on one edge, delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1126 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.2-0.3mm, ~20-50% thickness. Submucosal mucus glands present, rep. delineated
|
Acceptable
|
 |
GTEX-17KNJ
|
51-60
|
Male
|
GTEX-17KNJ-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, ~50% squamous mucosa, rest is stroma/mucus glands. <10% target muscularis present
|
Unacceptable
|
 |