GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0326 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0426 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces, fibroadipose elements only
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0526 |
Lung
|
PAXgene |
1
|
2 pieces, advanced fibrosing chronic pneumonitis, involves ~30% of tissue (delineated)
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0726 |
Coronary artery
|
PAXgene |
1
|
1 piece. ~60% occlusive calcifying atherosis, delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0826 |
Heart
|
PAXgene |
1
|
2 pieces, marked chronic ischemic changes/interstitial fibrosis, remote micro-infarcts present (rep delineated)
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-0926 |
Aorta
|
PAXgene |
1
|
6 pieces, atherosis up to ~0.6mm
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1026 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces, squamous mucosa up to ~0.2mm, partially sloughing. Submucosa mucus glands abundant, rep. delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis. Incidental ~1.5mm mucus gland, delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis, Myenteric nerve (ganglion) plexus unusually prominent, rep. focus delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, moderately abundant dermal fat up to ~2mm, rep delineated. Squamous epithelium is ~30-40 microns
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1426 |
Omentum
|
PAXgene |
1
|
2 pieces, only trace fascia
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1526 |
Liver
|
PAXgene |
1
|
2 pieces, macrovesicular steatosis in ~25% of parenchyma, mild/moderate passive congestion
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1626 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces, advanced saponification, islets not visible
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1826 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, cortex. Adherent fat is ~20% of specimen, delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-1926 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, glomeruli present; tubules variably but reasonably well preserved
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2026 |
Prostate
|
PAXgene |
1
|
2 pieces, mainly stroma; glandular elements variably preserved, some with urothelial metaplasia, rep delineated
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10-15% interstitial fat
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, focal adherent fat, nubbins up to ~1mm, rep delineated. Squamous epithelium is ~35-40 microns
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia up to ~10% of specimen
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2426 |
Testis
|
PAXgene |
1
|
2 pieces, prominent interstitial fibrosis; spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2526 |
Stomach
|
PAXgene |
3
|
6 pieces target muscosa up to ~1.2mm, ~50% thickenss, but with advanced autolysis/soughing
|
Acceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2626 |
Ileum
|
PAXgene |
3
|
5 pieces, trace fragments, autolyzed mucosa, no target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1I1GP
|
51-60
|
Male
|
GTEX-1I1GP-2726 |
Colon, transverse
|
PAXgene |
2
|
6 pieces target mucosa up to ~0.35mm, variably moderately autolyzed, ~30% thickness
|
Acceptable
|
 |