GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; adherent layer fat/seroa in 3 up to ~2mm thick; trace residual completely autolyzed mucosa
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2326 |
Ileum
|
PAXgene |
2
|
6 pieces, mucosa epithelium totally autolyzed; ~ abundant residual lympohid aggregates, ~30% total
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa completely autolyzed/sloughted
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~60-70 microns
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2626 |
Prostate
|
PAXgene |
1
|
2 pieces, glands mildly-moderately autolyzed
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2726 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, no ductal elements, all fibroadipose tissue
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2826 |
Testis
|
PAXgene |
2
|
2 pieces, autolysis variable from mild--moderate/severe. Spermatogenesis present, but appears reduced
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece, 60% adenohypophysis, 40 % neurohypophysis (delineated)
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no histologic abnormality
|
Acceptable
|
|
GTEX-11UD2
|
51-60
|
Male
|
GTEX-11UD2-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces Purkinje cells visualized; evidence of antemortem hypoxia.
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0126 |
Thyroid gland
|
PAXgene |
1
|
3 pieces, favor medullary carcinoma, involving the entire specimen (up to 8mm in greatest dimension)
|
Unacceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0226 |
Aorta
|
PAXgene |
1
|
6 pieces, intimal thickening
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0326 |
Heart
|
PAXgene |
0
|
2 pieces, increased interstitial fibrosis, myocyte hypertrophy
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0426 |
Atrial appendage
|
PAXgene |
1
|
3 pieces, one piece is predominantly fibrous/fat
|
Unacceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, calcific atherosclerosis, one piece is ~25% attached fat/nerve
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0626 |
Lung
|
PAXgene |
1
|
2 pieces, mild fibrosis, some hemosiderin-laden macrophages
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0726 |
Liver
|
PAXgene |
1
|
2 pieces, congested, includes capsule (target is 1 cm below capsule), chronic inflammation
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0826 |
Spleen
|
PAXgene |
1
|
2 pieces, >75% is fibrous trabeculae/vessels
|
Unacceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-0926 |
Pancreas
|
PAXgene |
2
|
2 pieces, ~20% and 50% fat, fibrosis and atrophy
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, well trimmed
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, epithelium predominantly sloughed, some submucosal glands and dilated ducts
|
Unacceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1226 |
Gastroesophageal junction
|
PAXgene |
2
|
7 pieces, muscularis (target) and squamous and gastric mucosa (not target, incorrect region)
|
Unacceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1326 |
Stomach
|
PAXgene |
3
|
6 pieces, severely autolyzed mucosa and muscularis
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1426 |
Kidney - cortex
|
PAXgene |
2
|
4 pieces, glomeruli in all sections, glomerulosclerosis
|
Acceptable
|
|
GTEX-11WQC
|
61-70
|
Male
|
GTEX-11WQC-1526 |
Adrenal glands
|
PAXgene |
3
|
2 pieces, one is 70% fat, second is 30% fat, severely autolyzed
|
Acceptable
|
|