GTEx Histological Images

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Case ID	Age	Gender	Specimen ID	Tissue Type	Fixative	Autolysis	Pathology Review Comments	Acceptability	Action
GTEX-14C39	41-50	Male	GTEX-14C39-1726	Skin, suprapubic	PAXgene	0	6 pieces, no dermal fat; squamous epithelium is ~50 microns	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-1826	Ileum	PAXgene	1	6 pieces, glandular mucosa autolyzed but residual target lymphoid aggregates are ~40% of tissue, rep delineated	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-1926	Colon, transverse	PAXgene	3	6 pieces, mucosa with advanced autolysis/sloughed	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2026	Adrenal glands	PAXgene	2	2 pieces, all cortex, moderate autolysis; adherent fat (delineated) is ~10-15% specimen	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2126	Kidney - cortex	PAXgene	2	6 pieces, glomeruli present, tubules autolyzed	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2226	Prostate	PAXgene	2	2 pieces hyperplastic glandular pattern, mucosal epithelium sloughing; basal cells present	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2326	Mammary tissue (breast)	PAXgene	1	2 pieces, mainly fibroadipose elements; trace ductal elements present; rep delineated	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2426	Muscle, skeletal	PAXgene	1	2 pieces, ~5-10% interstitial fat, slightly less well preserved than typical	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2526	Adipose tissue	PAXgene	0	2 pieces, minimal vascular elements/fascia, good specimen	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2626	Artery - tibial	PAXgene	0	2 pieces, clean, minimal atherosis, good specimen	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2726	Nerve - tibial	PAXgene	0	2 pieces, clean, minimal adherent fat, minute ~0.5mm nubbin delineated	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2826	Skin, leg	PAXgene	0	8 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-2926	Pituitary gland	PAXgene	1	1 piece, all adenohypophysis	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-3026	Brain - cerebellum	PAXgene	1	2 pieces, unusually edematous	Acceptable
GTEX-14C39	41-50	Male	GTEX-14C39-3126	Brain - cortex	PAXgene	1	2 pieces, unusually edematous	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0126	Thyroid gland	PAXgene	1	2 pieces, no abnormalities	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0226	Lung	PAXgene	1	2 pieces, focal early pneumonitis, delineated, diffuse atalectasis, bronchial mucosa fairly prominent, rep foci encircled	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0326	Spleen	PAXgene	1	2 pieces, no abnormalities	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0426	Omentum	PAXgene	1	2 pieces, ~5% fasca, delineated. Minute focus of mesothelial hyerplasia, ensquared	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0526	Pancreas	PAXgene	1	2 pieces, exceptionally well-preserved, Islets abundant, well visualized, rep encircled	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0626	Esophagus - muscularis	PAXgene	1	7 pieces, all taraget muscularis	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0726	Gastroesophageal junction	PAXgene	1	6 pieces, all target muscularis; trace adherent fat/serosa, delineated	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0826	Esophagus - mucosa	PAXgene	1	6 pieces, well preserved; squamous mcuosa is ~0.3mm, 20-30% thickness. Submucosal mucus glands present, rep delineated	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-0926	Stomach	PAXgene	1	6 pieces, generally well preserved mucosa up to ~1mm, 60-90% thickness. Several delineated foci of moderate-advance autolysis, delineated	Acceptable
GTEX-14DAR	41-50	Male	GTEX-14DAR-1026	Prostate	PAXgene	0	2 pieces, no abnormality; one section largely glandular stroma	Acceptable

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