GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1526 |
Liver
|
PAXgene |
2
|
2 pieces; severe (50%) perilobular fibrosis consistent with cardiac cirrhosis; moderate macrovesicular steatosis
|
Unacceptable
|
|
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-1726 |
Pancreas
|
PAXgene |
3
|
2 pieces; severe autolysis; 20% & 40% intralobular fat
|
Unacceptable
|
|
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-2226 |
Ileum
|
PAXgene |
3
|
4 pieces; scattered lymphoid nodules in severely autolyzed stroma with muscularis; LCM
|
Unacceptable
|
|
GTEX-1ICLZ
|
61-70
|
Male
|
GTEX-1ICLZ-2326 |
Testis
|
PAXgene |
3
|
2 fragmented pieces; severe fibrosis, hyalinization, autolysis and no obvious spermatogenesis
|
Unacceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-1626 |
Pancreas
|
PAXgene |
2
|
2 pieces; interacinar and interlobar fibrosis, atrophy, islets with variable replacement by amyloid
|
Unacceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2226 |
Ileum
|
PAXgene |
3
|
4 pieces; autolyzed mucosa with only focal lymphoid tissue and portion of muscularis (not target)
|
Unacceptable
|
|
GTEX-1IDFM
|
61-70
|
Male
|
GTEX-1IDFM-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; full thickness, mucosa is autolyzed with focal hemorrhage, muscularis is better preserved
|
Unacceptable
|
|
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-1126 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~40% target muscularis, ~60% mucosa/stroma/fat.
|
Unacceptable
|
|
GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-1226 |
Ileum
|
PAXgene |
1
|
6 pieces, mainly mucosa/muscularis, only trace target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; gastric mucosa; 3 pieces contain target muscularis (outlined)
|
Unacceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2126 |
Ileum
|
PAXgene |
2
|
6 pieces; moderately to severly autolyzed mucosa; residual target lymphoid aggregates are ~15 % of tissue (outlined)
|
Unacceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; mild to moderate mucosal autolysis; target muscularis preserved
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces; small intestine sampled no pancreas present
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0426 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; ventricular myocardium, not atrium
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces: 1 contains artery with 60% fat; other is 60% myocardium and 40% fat with vein, no artery. LCM
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; trachea sampled
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; trachea sampled
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-1226 |
Vagina
|
PAXgene |
1
|
6 pieces; uterus (lower segment) sampled not vagina
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-1326 |
Uterus
|
PAXgene |
1
|
2 pieces; adipose tissue, no uterus
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; 5 pieces have good lymphoiid nodules; 4 have muscularis propria; LCM
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; all are full thickness; should contain muscularis only. LCM
|
Unacceptable
|
|
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; vein and stroma, not nerve
|
Unacceptable
|
|
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; vein collected, not artery
|
Unacceptable
|
|
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1026 |
Lung
|
PAXgene |
1
|
2 pieces; extensive bronchopneumonia
|
Unacceptable
|
|
GTEX-1IDJF
|
21-40
|
Male
|
GTEX-1IDJF-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces: 3 with & 3 without mucosa; LCM
|
Unacceptable
|
|