GTEx Histological Images
Displaying 25 of 1198 results.
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| Case ID | Age | Gender | Specimen ID | Tissue Type | Fixative | Autolysis | Pathology Review Comments | Acceptability | Action |
| GTEX-S4Q7 | 21-40 | Male | GTEX-S4Q7-1126 | Mammary tissue (breast) | PAXgene | 0 | 2 aliquots, ~18x9mm. Male ductal units well-seen in one, examples encircled | Acceptable |  |
| GTEX-S4Z8 | 61-70 | Male | GTEX-S4Z8-1326 | Urinary bladder | PAXgene | 2 | 6 pieces up to 12x6 mm; cassette marking on tissue due to 'snug fit' in cassette; considerable epithelial sloughing | Acceptable | |
| GTEX-S7PM | 61-70 | Male | GTEX-S7PM-1026 | Heart | PAXgene | 2 | 2 aliquots, ~9x5mm. Confluent foci of remote fibrotic infarcts up to 7x3mm in dimensions, encircled | Acceptable | |
| GTEX-S7SE | 51-60 | Male | GTEX-S7SE-1826 | Adrenal glands | PAXgene | 3 | 2 aliquots ~12x6mm. LDACC NOTE: Adrenal cortex is only ~40% of both, 60% is fat in both, encircled | Acceptable | |
| GTEX-S7SF | 21-40 | Female | GTEX-S7SF-0426 | Lung | PAXgene | 1 | 2 pieces 11x87 10x9 mm; Bronchopneumonia in ~40% and interstitial fibrosis in ~60% | Acceptable | |
| GTEX-S7SF | 21-40 | Female | GTEX-S7SF-1226 | Mammary tissue (breast) | PAXgene | 1 | 2 pieces 13x6 & 10x7 mm; atrophic, fibrotic some residual lobules; ~25% adipose in 1 piece | Acceptable | |
| GTEX-S7SF | 21-40 | Female | GTEX-S7SF-2126 | Nerve - tibial | PAXgene | 0 | 2 pieces 6x4 & 3x3 mm; <10% adipose in larger | Acceptable | |
| GTEX-S95S | 51-60 | Male | GTEX-S95S-0726 | Pancreas | PAXgene | 1 | 2 aliquots ~8x6mm. LDACC NOTE: 2 foci of low grade ductal dyplasia, ~0.3mm in dimensions noted in one aliquot, ensquared. Good islets, representative ones encircled. Overall excellent preservation with minimal fat. | Acceptable | |
| GTEX-S95S | 51-60 | Male | GTEX-S95S-0826 | Stomach | PAXgene | 1 | 6 pieces, ~10x2mm. Mucosa extremely well-preserved, up to 50% of thickness in well-oriented pieces. | Acceptable | |
| GTEX-SE5C | 41-50 | Female | GTEX-SE5C-1526 | Colon, transverse | PAXgene | 0 | 6 pieces up to 7x4 mm; mucosa ~0.4 mm; very good mucosal preservation in all 6 pieces | Acceptable | |
| GTEX-SIU7 | 51-60 | Male | GTEX-SIU7-0626 | Kidney - medulla | PAXgene | 2 | 6 pieces up to 10x6 mm; 3 are pure medulla, 3 are mixed medulla and cortex; cortex shows severe vascular lesions as in 0725; label medulla, consider it mixed | Acceptable | |
| GTEX-SIU7 | 51-60 | Male | GTEX-SIU7-0726 | Kidney - cortex | PAXgene | 2 | 2 pieces 10x8 & 9x8 mm; cortex in both, 20% medulla in one; severe glomerular and vascular sclerosis; no normal glomeruli present; relabel as cortex | Acceptable | |
| GTEX-SIU7 | 51-60 | Male | GTEX-SIU7-0826 | Adrenal glands | PAXgene | 1 | 2 pieces 12x6 & 9x6 mm; mostly cortex; >50% poorly fixed adipose; several large nerves in one piece, ~10%. | Acceptable | |
| GTEX-SIU7 | 51-60 | Male | GTEX-SIU7-1626 | Mammary tissue (breast) | PAXgene | 1 | 2 pieces 10x7 & 11x7 mm; fibrocystic change in gynecomastia; 60% adipose | Acceptable | |
| GTEX-SIU7 | 51-60 | Male | GTEX-SIU7-1826 | Muscle, skeletal | PAXgene | 1 | 2 pieces 10x10 & 11x8 mm; moderate to severe atrophy and vacuolar degeneration; ~40% adipose in one aliquot; <10% in the other | Acceptable | |
| GTEX-SN8G | 51-60 | Female | GTEX-SN8G-1626 | Mammary tissue (breast) | PAXgene | 2 | 2 pieces ~8x5mm. Minute foci of atrophic TLDUs in one aliquot, encircled, mucosa poorly preserved | Acceptable | |
| GTEX-SN8G | 51-60 | Female | GTEX-SN8G-1726 | Adrenal glands | PAXgene | 3 | 2 pieces ~15x5mm. Mainly cortex, minute focus of badly autolyzed medulla visible in one aliquot, encircled. ** Gross impression of abnormality noted; no histologic abnormality seen** | Acceptable | |
| GTEX-SN8G | 51-60 | Female | GTEX-SN8G-1926 | Kidney - cortex | PAXgene | 3 | 2 pieces ~8x8mm, all cortex, a ~3mm nodule of fat in one, encircled. Tubules badly autolyzed | Acceptable | |
| GTEX-SN8G | 51-60 | Female | GTEX-SN8G-2526 | Uterus | PAXgene | 3 | 2 pieces /`8x8mm, endometrium totally autolyzed in one, absent in the other | Acceptable | |
| GTEX-SN8G | 51-60 | Female | GTEX-SN8G-2826 | Stomach | PAXgene | 2 | 6 pieces ~8x3mm. Mucosa up to ~50% of thickness, badly autolyzed in most aliquots | Acceptable | |
| GTEX-SNOS | 41-50 | Male | GTEX-SNOS-0526 | Urinary bladder | PAXgene | 1 | 6 pieces up to 10x5 mm; mucosa not in sections | Acceptable | |
| GTEX-SNOS | 41-50 | Male | GTEX-SNOS-1026 | Prostate | PAXgene | 1 | 2 pieces 10x7 & 8x8 mm; mostly fibromuscular hyperplasia; a few glands in one aliquot | Acceptable | |
| GTEX-SNOS | 41-50 | Male | GTEX-SNOS-1726 | Artery - tibial | PAXgene | 0 | 2 pieces ,2 mm artery; a few punctate calcium deposits in intima; clean, no adipose | Acceptable | |
| GTEX-SSA3 | 61-70 | Male | GTEX-SSA3-0326 | Muscle, skeletal | PAXgene | 0 | 2 pieces ~8x7mm. Prominent band of scarring/fibrosis encircled, largest confluent focus ~1.5x1mm in one aliquot, ~15 % of specimen | Acceptable | |
| GTEX-SUCS | 61-70 | Male | GTEX-SUCS-1426 | Pancreas | PAXgene | 1 | 2 pieces 11x4 & 9x7 mm; mild patchy fibrosis; ~10% adipose at one edge; scattered adipose in parenchyma | Acceptable | |