GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-0926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces; no lesions; well trimmed
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1026 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; poorly preserved mucosa; edematous submucosa occupies 60%
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1126 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 30% fibrous & neural content in 1 piece, other has 5% same
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1226 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; all have mucosa and muscularis; LCM
|
Unacceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed subcutaneous tissue
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; 6 lymphoid nodules in 4 pieces [circled for LCM]; all have muscularis [not target]
|
Unacceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1526 |
Stomach
|
PAXgene |
2
|
6 pieces; all have only mucosa and submucosa, no muscularis propria; basal glandular dilatation
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; minimal internal & external fat
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; prominent submucosal glands in most pieces
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well dissected muscle
|
Acceptable
|
 |
GTEX-17F98
|
41-50
|
Female
|
GTEX-17F98-1926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscle
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~20% fascia, rep delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0226 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~15% interstitial fat/vascular elements, rep. delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent fat, ~0.5mm, delineated. SQuamous eipthelium is ~50-60 microns
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces. trace adherent fat, good specimnes
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, trace rim of fibrous tissue
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0726 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-0926 |
Heart
|
PAXgene |
1
|
2 pieces cardiac muscle (heart), switched with -1025
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1026 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, target gastroesophageal junction muscularis, switched with -0925
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, minimal atherosis. ~2.5mm nubbin of adherent fat, delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1326 |
Omentum
|
PAXgene |
1
|
2 pieces 15% fascia/vascular elements, rep delineated
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1426 |
Pancreas
|
PAXgene |
1
|
2 pieces, ~50% adherent/insterstitial fat, delineated. Islets well preserved, rep encircled
|
Acceptable
|
 |
GTEX-17F9E
|
51-60
|
Male
|
GTEX-17F9E-1526 |
Ileum
|
PAXgene |
1
|
6 pieces, well preserved, no target lympohid aggregates, not worth GTEX analysis. Contaminant pancreatic tisue present, ensquared
|
Unacceptable
|
 |