GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2126 |
Mammary tissue (breast)
|
PAXgene |
2
|
1 piece (fragments), gynecomastoid stromal and ductal (rep delineated) hyperplasia-ductal elements poorly preserved
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2226 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1.3mm, ~40-50% thickness, moderately advanced autolysis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2326 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with advanced autolysis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2426 |
Testis
|
PAXgene |
2
|
2 pieces, autolysis precludes assessment of spermatogenesis
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2526 |
Ileum
|
PAXgene |
3
|
6 pieces, No target lymphoid aggregates, ~70% muscularis/adipose tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.2mm, advanced autolysis, glandular elements sloughed
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2726 |
Colon, sigmoid
|
PAXgene |
1
|
5 pieces, ~40% target muscularis, rest is fat/fibrous tissue
|
Unacceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2826 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~90% glandular elements, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-2926 |
Pituitary gland
|
PAXgene |
2
|
1 piece, mainly adenohypophysis, 4x1mm nubbin of neurohypophysis, delineated
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HFI6
|
41-50
|
Male
|
GTEX-1HFI6-3126 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; well trimmed; 10% dermal fat; several hair follicles
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0226 |
Omentum
|
PAXgene |
1
|
2 pieces; 10% fibrous content in 1 piece; minimal in the other
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0326 |
Aorta
|
PAXgene |
1
|
6 pieces; minimal plaque; 1mm thick fibrous adventitia
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0426 |
Heart
|
PAXgene |
1
|
2 pieces; patchy fibrosis, <5%; 15% pericardial fat on 1 piece
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0526 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; 1 piece is all fat
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0626 |
Lung
|
PAXgene |
1
|
2 pieces; pulmonary edema with alveolar macrophages; moderate congestion
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; minmal extraneous tissue
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0826 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well dissected muscularis
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; epithelium focally fragmented
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1026 |
Liver
|
PAXgene |
1
|
2 pieces; moderate centrilobular congestion
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1126 |
Gastroesophageal junction
|
PAXgene |
3
|
6 pieces; all contain autolyzed glandular mucosa, not muscularis
|
Unacceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1226 |
Stomach
|
PAXgene |
2
|
6 pieces; 95% muscularis propria with small foci of completely autolyzed mucosa
|
Unacceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1326 |
Spleen
|
PAXgene |
2
|
2 fragmented pieces; moderate red pulp congestion
|
Acceptable
|
 |
GTEX-1HGF4
|
61-70
|
Male
|
GTEX-1HGF4-1426 |
Pancreas
|
PAXgene |
2
|
2 pieces; some areas have slight autolysis; 50% internal & external fatty and fibrofatty content
|
Acceptable
|
 |