GTEX-1HBPI
|
41-50
|
Male
|
GTEX-1HBPI-2626 |
Pituitary gland
|
PAXgene |
1
|
1 piece; anterior and posterior lobes represented
|
Acceptable
|
 |
GTEX-1HBPI
|
41-50
|
Male
|
GTEX-1HBPI-2726 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
 |
GTEX-1HBPI
|
41-50
|
Male
|
GTEX-1HBPI-2826 |
Brain - cortex
|
PAXgene |
1
|
4 pieces; adherent meninges on 1 piece
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~30-35 microns
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~35 microns
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, trace adherent fat
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat; trace atherosis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces; ~10% interstitial fat/vascular elements
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0626 |
Coronary artery
|
PAXgene |
0
|
2 pieces, minute ((<1mm) probable branch (delineated). Excessive contaminating adherent fat.
|
Unacceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0726 |
Adipose tissue
|
PAXgene |
0
|
2 pieces; ~20% fascia; rep delineated.
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0826 |
Heart
|
PAXgene |
1
|
2 pieces, diffuse lymphoid infiltrate with myocyte destruction c/w myocarditis.
Reviewed by NIH consult panel
|
Unacceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, mild intersitial chronic inflammation
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1026 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1126 |
Lung
|
PAXgene |
1
|
2 pieces diffuse interstitial mixed inflammation and acute/purulent bronchoitis/bronchioliits. Reviewed by NIH consult panel.
|
Unacceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa up to ~0.3mm, ~20-30% thickness
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1526 |
Omentum
|
PAXgene |
1
|
2 pieces, trace mononuclear cells
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1626 |
Stomach
|
PAXgene |
1
|
6 pieces, mucosa up to ~1mm, ~40-50% thickness
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1726 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces mainly gastric mucosa, not target esophageal/GEJ muscularis
|
Unacceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, mucosa up to ~0.3mm, ~40% thickness
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-1926 |
Ileum
|
PAXgene |
1
|
6 pieces, ~15% target lymphoid aggregates, rep delineated
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~30% 'contaminant mucosa (rep delineated); rest is target muscularis
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-2126 |
Prostate
|
PAXgene |
1
|
2 pieces, mainly stroma, no abnormalitites
|
Acceptable
|
 |
GTEX-1HBPN
|
51-60
|
Male
|
GTEX-1HBPN-2226 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis present but appears reduced. Trace atypical mononculear cells
|
Acceptable
|
 |