GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; predominantly target muscularis, small amount of residual fat/vessels and detached squamous epithelial cells
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1026 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; 1 is 30% fat, 2nd is ~90% fat/vessels
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1126 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; epithelium is partially sloughed, few clusters of submucosal glands
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness sections, mucosa autolyzed (3), muscularis (2)
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1326 |
Liver
|
PAXgene |
2
|
2 pieces; steatosis, moderate autolysis
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1426 |
Spleen
|
PAXgene |
2
|
2 pieces; significant component is vessels/trabeculae, portion of fat
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces; autolyzed
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1626 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; tubules are very autolyzed, glomeruli (some sclerotic) in all sections, however, 1 of 6 is predominantly medulla
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1726 |
Ileum
|
PAXgene |
3
|
6 pieces; full thickness (muscularis not target), autolyzed
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1826 |
Prostate
|
PAXgene |
3
|
2 pieces; fibromuscular stroma, glandular lining sloughed, 1 piece is 50% fat and nerve
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-1926 |
Testis
|
PAXgene |
2
|
2 pieces; spermatogenesis is present
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2026 |
Minor salivary glands
|
PAXgene |
1
|
1 piece; well preserved, 60% salivary gland elements, 40% lip/fat
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2126 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; largely disrupted sections, some residual fat
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; predominantly fat with scattered fibrous tissue and nerve, no ductal elements in this section
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2326 |
Stomach
|
PAXgene |
2
|
6 pieces; predominantly mucosa with minimal muscularis, moderate to severe autolysis
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2426 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces; full thickness sections (target is mucularis only)
|
Unacceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2526 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; 1 is largely white matter
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2626 |
Pituitary gland
|
PAXgene |
2
|
1 piece; adenohypophysis
|
Acceptable
|
 |
GTEX-1H4P4
|
51-60
|
Male
|
GTEX-1H4P4-2726 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; Purkinje cells well visualized
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, no significant dermal fat; squamous epithelium is ~25-36 microns
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces; no significant dermal fat; squamous epithelium is ~50 microns
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are ~35% of tissue (rep delineated)
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia/vascular elements are ~10-15% of tissue
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0526 |
Omentum
|
PAXgene |
0
|
2 pieces, fascia/vascular elements are ~5-10% of tissue
|
Acceptable
|
 |
GTEX-1HB9E
|
51-60
|
Male
|
GTEX-1HB9E-0626 |
Liver
|
PAXgene |
1
|
2 pieces, moderate fibrosis, cardiac congestion and chronic hepatitis
|
Acceptable
|
 |