GTEX-Y5V6
|
61-70
|
Male
|
GTEX-Y5V6-1426 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, up to 7x2mm; only 1 of 6 has muscularis
|
Acceptable
|
 |
GTEX-Y8E4
|
41-50
|
Male
|
GTEX-Y8E4-2426 |
Colon, transverse
|
PAXgene |
2
|
1 piece, 9x3mm; well trimmed
|
Acceptable
|
 |
GTEX-Y8LW
|
51-60
|
Female
|
GTEX-Y8LW-1226 |
Colon, transverse
|
PAXgene |
1
|
1 piece, 7x2mm; all muscularis; no mucosa
|
Acceptable
|
 |
GTEX-Y9LG
|
21-40
|
Male
|
GTEX-Y9LG-1526 |
Colon, transverse
|
PAXgene |
1
|
1 piece with small amount (1.6x0.8 mm) muscularis propria.
|
Acceptable
|
 |
GTEX-YB5E
|
41-50
|
Male
|
GTEX-YB5E-1626 |
Colon, transverse
|
PAXgene |
1
|
1 piece, 13x875.6um; 40-60% mucosa, reasonably well-preserved
|
Acceptable
|
 |
GTEX-YB5K
|
41-50
|
Female
|
GTEX-YB5K-1226 |
Colon, transverse
|
PAXgene |
2
|
1 piece. 7x3.5mm; small intestine not colon
|
Unacceptable
|
 |
GTEX-YEC3
|
51-60
|
Male
|
GTEX-YEC3-2426 |
Colon, transverse
|
PAXgene |
1
|
1 piece, 6x3mm; correlates with 2425, all muscularis/fat
|
Acceptable
|
 |
GTEX-YEC4
|
21-40
|
Male
|
GTEX-YEC4-1926 |
Colon, transverse
|
PAXgene |
1
|
1 piece (10x5mm), correlates with 1925
|
Acceptable
|
 |
GTEX-YECK
|
61-70
|
Male
|
GTEX-YECK-2626 |
Colon, transverse
|
PAXgene |
3
|
1 piece, correlates with -2625, mucosa badly autolyzed
|
Acceptable
|
 |
GTEX-YF7O
|
51-60
|
Male
|
GTEX-YF7O-1726 |
Colon, transverse
|
PAXgene |
1
|
1 piece; comparable to 25 block
|
Acceptable
|
 |
GTEX-YFC4
|
41-50
|
Female
|
GTEX-YFC4-2426 |
Colon, transverse
|
PAXgene |
3
|
1 piece, mucosa badly autolyzed, correlates perfeclty with -2425
|
Acceptable
|
 |
GTEX-YFCO
|
41-50
|
Male
|
GTEX-YFCO-1426 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; mucosa represents ~15% of thickness.
|
Acceptable
|
 |
GTEX-YJ89
|
51-60
|
Male
|
GTEX-YJ89-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa autolysis=3, muscularis autolysis=2
|
Acceptable
|
 |
GTEX-YJ8O
|
21-40
|
Female
|
GTEX-YJ8O-0726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.5mm thick but badly preserved and partly sloughed
|
Acceptable
|
 |
GTEX-Z93S
|
51-60
|
Male
|
GTEX-Z93S-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa badly autolyzed/sloughed
|
Acceptable
|
 |
GTEX-Z9EW
|
41-50
|
Male
|
GTEX-Z9EW-1326 |
Colon, transverse
|
PAXgene |
1
|
4 pieces, small intestinal mucosa and muscularis. Uncertain location, can't be used for GTEx but should be retained for future studies
|
Unacceptable
|
 |
GTEX-ZA64
|
21-40
|
Male
|
GTEX-ZA64-1326 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, all colon, mucosa is ~0.3m mm thick, promienent lymphoid follicles noted; rep. ones delineated. Switched with 1225; may be used once relabeld correctly as colon; good specimens.
|
Acceptable
|
 |
GTEX-ZAB4
|
41-50
|
Male
|
GTEX-ZAB4-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces. Full thickness with 3 having pericolonic adipose up to 1 mm. Mucosa=3; muscle=1.
|
Acceptable
|
 |
GTEX-ZAB5
|
51-60
|
Male
|
GTEX-ZAB5-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
GTEX-ZAJG
|
51-60
|
Female
|
GTEX-ZAJG-2426 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa badly autolyzed, ~10% thickness
|
Acceptable
|
 |
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa ~10-40% thickness but totally autolyzed/sloughing
|
Acceptable
|
 |
GTEX-ZC5H
|
41-50
|
Female
|
GTEX-ZC5H-2526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, mucosa moderately-severely autolzyed, ~300 micrions thick
|
Acceptable
|
 |
GTEX-ZDTS
|
61-70
|
Male
|
GTEX-ZDTS-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa = autolysis 3; muscle = 2
|
Acceptable
|
 |
GTEX-ZDTT
|
61-70
|
Male
|
GTEX-ZDTT-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, several with attached adipose tissue from 5-50%.
|
Acceptable
|
 |
GTEX-ZDXO
|
51-60
|
Male
|
GTEX-ZDXO-1826 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa up to ~0.5mm thick but completely autolyzed
|
Acceptable
|
 |