GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 10x8 & 10x7mm; 1 is all adipose, other contains 40% fibrovascular tissue
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, 6x5 & 5x4mm; 10-20% adipose
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, 4x2 & 4x1mm; well trimmed
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0626 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, 10x7 & 10x6mm; well trimmed, <10% internal adipose
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0726 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 9x3mm; well dissected without subcutaneous adipose
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0826 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, 9x7 & 8x7mm; 10% stroma at edge of smaller piece
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-0926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 10x7 & 10x6mm; ducts present
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1026 |
Lung
|
PAXgene |
2
|
2 pieces, 8x7 & 8x7.5mm; emphysema
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 9x8.5 & 10x9mm; up to 50% interstitial fibrous tissue
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1226 |
Heart
|
PAXgene |
1
|
2 pieces, 8x8 & 9x6.5mm; 1 with 1mm thick pericardium possibly related to history of coronary bypass surgery)
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 4mmx1m & 3x3mm; 1 with fibrocalcific plaque; history of coronary artery bypass graft
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1426 |
Spleen
|
PAXgene |
2
|
2 pieces, 11x8 & 9x7.5mm;
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1526 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 7x2.5mm; uniform fibrous intimal plaques; fibrous adventitia up to 0.5 mm
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1626 |
Liver
|
PAXgene |
1
|
2 pieces, 8x7 & 8x8mm; 20% macrovesicular steatosis
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1726 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, up to 7x2mm; partly detached mucosa
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1826 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces, up to 10x2.5mm; all muscle
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-1926 |
Gastroesophageal junction
|
PAXgene |
2
|
6 pieces, up to 8.5x5mm; all muscle except smallest piece is 60% fibroadipose (annotated)
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2026 |
Omentum
|
PAXgene |
1
|
2 pieces, 8x7 & 8x8mm; no artifacts
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2126 |
Pancreas
|
PAXgene |
2
|
2 pieces, 8x8 & 7x7mm; 10 and 20% adipose, external and internal
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2226 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, 7x6.5 & 7.5x6mm; 1, 60% adipose; other >90% adipose
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2326 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, up to 7.5x2mm; 3 pieces are cortex (autolysis=2); 3 are medulla (autolysis=3)
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2426 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 7x3mm; mostly mucosa/submucosa (targets) but extensively autolyzed; small lymphoid foci
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2526 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 10x3mm; mucosa autolysis= 2 and 3; muscularis = 2
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 7x3mm; mucosa mostly 3, some foci are 2; muscularis=2 (autolysis)
|
Acceptable
|
|
GTEX-X4XY
|
61-70
|
Male
|
GTEX-X4XY-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 8x1.5mm; all muscle (target)
|
Acceptable
|
|