|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0826 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, sections of small intestine, unknown location, not GTEx target
|
Unacceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-0926 |
Ileum
|
PAXgene |
1
|
6 pieces, fibroadipose tissue, not GTEx target
|
Unacceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1026 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat, squamous epithelium is ~60 microns
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose parenchymal elements, no ductal elements
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1226 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, 95% glandular/ductal elements, delineated
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1326 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace adherent dermal fat; squamous epithelium is ~30-40 microns
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1426 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia, rep delineated
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1526 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements ~25% specimen, rep delineated
|
Acceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1626 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, mainly fat/fibrous tissue, target artery is <20% specimen
|
Unacceptable
|
 |
|
GTEX-169BO
|
51-60
|
Male
|
GTEX-169BO-1726 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, rims of adherent fat, 1-1.5mm
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion, one piece contains capsule
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0226 |
Pancreas
|
PAXgene |
1
|
2 pieces; well preserved parenchyma and islets (rep outlined)
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0326 |
Omentum
|
PAXgene |
0
|
2 pieces, fragmented; mature adipose tissue
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0426 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; interstitial fibrosis with nodularities and associated lymphocytic infiltration (Hashimoto's thyroiditis)
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0526 |
Lung
|
PAXgene |
1
|
2 pieces; congestion, includes pleura (target is 1 cm below pleura)
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0626 |
Mammary tissue (breast)
|
PAXgene |
0
|
2 pieces; lobules and ducts embedded in fibroadipose tissue
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0726 |
Uterus
|
PAXgene |
2
|
2 pieces; myometrium with scant glandular component in one piece (arrowed), ? lower uterine segment
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0826 |
Vagina
|
PAXgene |
1
|
6 pieces; variable fragments with minimal squamous epithelium in 3, associated chronic inflammation (outlined), muscle
|
Unacceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-0926 |
Aorta
|
PAXgene |
1
|
6 pieces
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; surface epithelium desquamation and focal epithelial dissociation; squamous mucosa ~ 0.3mm thick; submucosal mucus glands and focal lymphocytic aggregates in submucosa; taken at GE junction (not target region 4 cm above), small leiomyoma
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1126 |
Esophagus - muscularis
|
PAXgene |
0
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; well preserved gastric mucosa, lamina propria and muscularis (muscularis present in 2 of 6 pieces)
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1426 |
Ileum
|
PAXgene |
2
|
6 pieces; autolyzed mucosa and abundant lymphoid component, several pieces include significant muscularis (not target)
|
Acceptable
|
 |
|
GTEX-16A39
|
21-40
|
Female
|
GTEX-16A39-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces; moderately autolyzed mucosa and well preserved muscularis
|
Acceptable
|
 |