GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, 11x10 & 10x9mm; fibrofatty tissue with scattered atrophic lobules and ducts
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2126 |
Omentum
|
PAXgene |
1
|
2 pieces, 9x8 & 9x8mm; central fragmentation
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2226 |
Vagina
|
PAXgene |
2
|
6 pieces, up to 8x3mm; squamous epithelium shows high grade dysplasia overall
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2326 |
Uterus
|
PAXgene |
1
|
2 pieces, 9x6 & 9x6mm; myometrium and atrophic endometrium with small foci of glands
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2426 |
Ovary
|
PAXgene |
2
|
2 pieces, 7.5x7 & 7x7mm; atrophic with corpora albicans; 20-40% fibrovascular and adipose tissue
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, up to 9x5mm; mucosa=3; muscularis =2
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2626 |
Ileum
|
PAXgene |
3
|
4 pieces, up to 5x2mm; mucosa and lymphoid tissue autolyzed; well trimmed from muscularis
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2726 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, up to 6x2mm; all muscle, no mucosa (good)
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2826 |
Stomach
|
PAXgene |
3
|
6 pieces, up to 7x1mm; totally autolyzed mucosa; muscle also autolyzed; of limited molecular value
|
Acceptable
|
|
GTEX-X4EO
|
61-70
|
Female
|
GTEX-X4EO-2926 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, up to 9x3mm; up to 2mm thick subcutaneous adipose
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, up to 7.5x2mm; squamous epithelium is ~2% thickness
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, 7x5 & 8x7mm;
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0326 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, 7x7 & 8x7mm;
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0426 |
Heart
|
PAXgene |
1
|
2 pieces, 7x7 & 6x5mm; minimal ischemic changes
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0526 |
Lung
|
PAXgene |
2
|
2 pieces, 8x6 & 7x7mm; emphysematous changes
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0626 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, up to 7x3mm; squamous epithelium is ~1-2% thickness
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0726 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, 4x2.5 & 4x2mm; reasonably clean specimens
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0826 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, 4x2 & 3x2.5mm; up to~0.5mm adherent fat, discontinuous, delineated
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-0926 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, 9x8 & 9x9mm; ~10% interstitial fat, rep area delineated
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1026 |
Liver
|
PAXgene |
2
|
2 pieces, 9x8 & 8.5x8mm; diffuse macrovesicular steatosis with early cirrohsis; rep steatotic areas delineated
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1126 |
Spleen
|
PAXgene |
3
|
2 pieces, 10x7 & 8x7mm;
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1226 |
Pancreas
|
PAXgene |
3
|
2 pieces, 11x8 & 10x6.5mm; badly saponified/autolyzed, Islets not well visualized
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1326 |
Coronary artery
|
PAXgene |
1
|
2 pieces, 3x2 & 3x3mm; adherent fat delineated
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1426 |
Aorta
|
PAXgene |
1
|
6 pieces, up to 8x2mm; atherosis present up to ~ 0.2mm thick
|
Acceptable
|
|
GTEX-X4EP
|
61-70
|
Female
|
GTEX-X4EP-1526 |
Stomach
|
PAXgene |
2
|
6 pieces, up to 8x2mm; mucosa is ~30-50% thickness, variably but generally badly autolyzed
|
Acceptable
|
|