GTEX-1H11D
|
41-50
|
Male
|
GTEX-1H11D-2426 |
Adrenal glands
|
PAXgene |
0
|
2 pieces; small attachment of fat (~5%)
|
Acceptable
|
 |
GTEX-1H11D
|
41-50
|
Male
|
GTEX-1H11D-2526 |
Ileum
|
PAXgene |
1
|
6 pieces; several include significant lymphoid tissue, few strips of residual musculairs
|
Acceptable
|
 |
GTEX-1H11D
|
41-50
|
Male
|
GTEX-1H11D-2626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0126 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements, trace ducts, rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0426 |
Lung
|
PAXgene |
1
|
2 pieces, patchy mild edema
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0526 |
Liver
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0626 |
Aorta
|
PAXgene |
1
|
6 pieces, trace atherosis
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0726 |
Pancreas
|
PAXgene |
1
|
2 pieces, well preserved, Islets abundant and well-visualized; rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0826 |
Omentum
|
PAXgene |
1
|
2 pieces, vascular elements are ~5-10% of tissue
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-0926 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; trace 'contaminant squamous mcuosa, ~5-10% total, rep delineated
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.2mm, 10-15% thickness
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1126 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, GEJ mucosa, not correct site, reflux inflammation present. prominent mucus glands delineated.
|
Unacceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1226 |
Stomach
|
PAXgene |
1
|
6 pieces, muscularis only, mucosa sloughed, presumed autolyzed
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1326 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, adherent nubbins dermal fat up to ~5mm, rep delineated; squamous epithelium is ~60-70 microns
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1426 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa completely autolyzed, target lymphoid aggregates are ~10-20% tissue
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1526 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, glandular mucosa up to ~0.2mm, partially sloughing
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis.
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1726 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, trace interstitial fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, nerve is ~70% of specimen (delineated) rest is adherent/interstitial fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no atherosis/adherent fat
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-2026 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, barely trace fascia
|
Acceptable
|
 |
GTEX-1H1DE
|
21-40
|
Male
|
GTEX-1H1DE-2126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no adherent fat; squamous epithelium is ~35-45 microns
|
Acceptable
|
 |
GTEX-1H1DG
|
61-70
|
Male
|
GTEX-1H1DG-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, adherent dermal fat up to ~1mm nubbins, rep delineated; squamous epithelium is ~50 microns
|
Acceptable
|
 |