GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1226 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue with minimal fibrovascular component
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1326 |
Liver
|
PAXgene |
1
|
2 pieces; fatty degeneration, fibrosis consistent with cirrhosis, and inflammation
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1426 |
Aorta
|
PAXgene |
1
|
6 pieces; evolving atherosclerotic plaque (arrow), attached ~1mm congested adventitia
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1526 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces; renal cortex with patchy interstitial fibrosis and hyalinized glomeruli (rep arrowed)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1626 |
Adrenal glands
|
PAXgene |
2
|
2 pieces; moderately autolyzed adrenal cortex and medulla, ~40% and 50% internal/external fat (outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1726 |
Spleen
|
PAXgene |
2
|
2 pieces; congestion
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1826 |
Testis
|
PAXgene |
1
|
2 pieces; Sertoli cells, reduced/absent spermatogenesis, increased Leydig cells, c/w atrophy, congestion
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1926 |
Ileum
|
PAXgene |
3
|
6 pieces; severe autolysis of mucosa, muscularis (not target) is better preserved, lack of target lymphoid aggregates
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2026 |
Esophagus - mucosa
|
PAXgene |
2
|
6 pieces; mucosa largely autolyzed/sloughed, outlined submucosal glands, preserved muscularis, congestion
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; well trimmed target muscularis
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2226 |
Stomach
|
PAXgene |
2
|
6 pieces; one piece with fragment of autolyzed gastric mucosa (arrow) and well preserved muscularis
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2326 |
Pancreas
|
PAXgene |
3
|
2 pieces; moderate to severe parenchymal and fat autolysis, ~15% and 5% external fat (arrows), interstitial fibrosis, very rare islets (rep outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2426 |
Prostate
|
PAXgene |
2
|
2 pieces; fibromuscular stroma and autolyzed glandular component ~75%, ~25% well preserved glandular component lined by urothelial epithelium (arrows), ganglion
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces;~60% glandular and ductal elements and ~40% surrounding fat
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; adipose tissue and ductal structures embedded in loose, cellular connective tissue, c/w gynecomastoid change
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with a few scattered lymphoid aggregates (outlined) and trace of preserved muscularis (arrows), largely fat/submucosa
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of muscularis
|
Unacceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2926 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; target muscularis and two pieces with attached fat/vessels up to 2mm (arrows)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3026 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces; Purkinji cells well visualized, focal residual meninges (arrow)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3126 |
Pituitary gland
|
PAXgene |
2
|
1 piece; predominantly adenohypophysis and tiny focus of neurohypohysis (outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-3226 |
Brain - cortex
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed; 10% dermal fat; foci of benign keratosis
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 5% fibrous content
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-0326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces; 40% & 20% internal and external fat content
|
Acceptable
|
 |
GTEX-1GZ4I
|
51-60
|
Male
|
GTEX-1GZ4I-0426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; no plaques; well dissected
|
Acceptable
|
 |