GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1826 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, glomeruli present, tubules with mild-moderate autolysis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1926 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderately advanced saponification; ~40% adherent/interstitial adipose tissue, rep delineated
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2026 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, trace dermal fat, delineated; squamous epithelium is is ~40-50 microns
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2126 |
Prostate
|
PAXgene |
2
|
2 pieces, glandular elements with advanced autolysis; pronounced nodular glandular and stromal htyprerplasia
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2226 |
Testis
|
PAXgene |
2
|
2 pieces, spermatogenesis appears reduced
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2326 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa with moderate-marked glandular autolysis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2426 |
Ileum
|
PAXgene |
3
|
6 pieces,; insufficient lymphoid aggregates for analysis in correct target
|
Unacceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2526 |
Minor salivary glands
|
PAXgene |
0
|
1 piece, ~60% glandular elements (rep delineated), rest is interstitial/adherent fat. Evidence of remote sialadenitis with scarring
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2726 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa up to ~1mm, ~50% thickness, moderate-advanced autolysis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements with a few ductal elements, rep. delineated
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2926 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-3026 |
Brain - cortex
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, mainly adenohypophysis; ~2mm nubbin of neurohypophysis, delineated
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0126 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces; hair bearing skin with 20% to 40% dermal fat
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; benign keratosis and 20% to 40% intradermal fat and empty spaces, ~34 microns thick epidermis
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; mature adipose tissue with fibrovascular component and one piece with vessel wall (outlined) up to ~3mm in thickness
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0426 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; ~20% internal fat
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; ~40% internal/external fat
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; thin rim of adherent adventitia
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0726 |
Lung
|
PAXgene |
1
|
2 pieces; severe congestion and intraalveolar hemorrhage, focal pleural coverage with fibrosis and anthracotic pigmentation (arrows), a few small bronchi with sloughed mucosa (outlined)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0826 |
Thyroid gland
|
PAXgene |
2
|
2 pieces; small ~ 1mm in diameter well circumscribed likely adenomatous nodule (outlined), some interstitial fibrosis, variably sized follicles
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; one piece with ~60% internal fat and fibrosis
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1026 |
Heart
|
PAXgene |
1
|
2 pieces; interstitial fibrosis and scarring (rep outlined), fatty degeneration (arrows)
|
Acceptable
|
 |
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1126 |
Coronary artery
|
PAXgene |
1
|
2 pieces; poorly oriented specimen consists of adipose tissue (outlined) and fragmented vascular wall with possible fibrous plaque (arrows)
|
Acceptable
|
 |