GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1326 |
Stomach
|
PAXgene |
1
|
6 pieces; full thickness sections
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1426 |
Testis
|
PAXgene |
1
|
2 pieces; active spermatogenesis
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1526 |
Lung
|
PAXgene |
1
|
2 pieces; some collapse, bronchopneumonia
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1626 |
Prostate
|
PAXgene |
1
|
2 pieces; one piece has good admixture of stroma and glands, second is predominantly stroma
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; muscularis (target is full thickness) - can be compared to sigmoid colon specimen
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1826 |
Skin, suprapubic
|
PAXgene |
0
|
5 pieces; well trimmed, scant internal fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-1926 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; muscularis with trace residual mucosa and attached fat
|
Acceptable
|
 |
GTEX-1GPI7
|
21-40
|
Male
|
GTEX-1GPI7-2026 |
Ileum
|
PAXgene |
1
|
6 pieces; full thickness sections with residual attached fat, several good lymphoid follicles in 2 of 6 pieces
|
Unacceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~50-60 microns
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia elements are ~40%, rep delineated
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are ~5-10% tissue
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, no adherent fat
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant atherosis or adherent fat; prominent Monckeberg mediial sclerosis, rep delineated
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0626 |
Lung
|
PAXgene |
1
|
2 pieces, moderate congestion
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, no abnormalitites, focal adhereant fat, delineated
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0826 |
Aorta
|
PAXgene |
1
|
6 pieces, no significant atherosis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-0926 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, ~40-50% clot (delineated)
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1026 |
Heart
|
PAXgene |
1
|
2 pieces, moderate chronic ischemic changes
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1126 |
Liver
|
PAXgene |
1
|
2 pieces, diffuse macrovesicular steatosis involves ~60% of parenchyma; moderate passive congestion
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1226 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is up to ~0.4mm, ~40-50% thickness
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1526 |
Omentum
|
PAXgene |
1
|
2 pieces, only trace fascia elements
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
 |
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1726 |
Adrenal glands
|
PAXgene |
1
|
2 pieces, ~all cortex, ~20-25% adherent fat/fibromuscular tissue, delineated
|
Acceptable
|
 |