GTEX-1IDJC
|
51-60
|
Male
|
GTEX-1IDJC-1626 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces, ~50% glandular parenchyma; delineated; rest is stroma/squamous mucosa; sample with care
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0126 |
Pancreas
|
PAXgene |
1
|
2 pieces; well preserved parenchyma with Langerhans islets (rep outlined); 30% and 5% internal/external fat
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; ~50% and ~40% internal fat
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0326 |
Aorta
|
PAXgene |
1
|
6 pieces; up to 0.8mm rim of adherent adventitia
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0426 |
Coronary artery
|
PAXgene |
1
|
2 pieces; one well trimmed; other with 1.5mm adherent fat
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0526 |
Heart
|
PAXgene |
1
|
2 pieces; focal interstitial fibrosis (outlined); autolyzed fatty degeneration (arrows)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0626 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; focal fibrosis/scarring (arrows)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0726 |
Spleen
|
PAXgene |
1
|
2 pieces; congestion
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0826 |
Lung
|
PAXgene |
1
|
2 pieces; congestion and collapsed alveolar spaces containing exfoliated alveolar epithelial cells; larger vessels included (arrows)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-0926 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature adipose tissue
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1026 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; fibroadipose tissue devoid of ductal structures
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1126 |
Skin, leg
|
PAXgene |
1
|
6 pieces;~47 micron thick epidermis; ~10% periadnexal fat (arrows)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; ~5% internal fat and small focus of external fat (arrow)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1426 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; not nerve, cross sections of artery with small rim of adventitia; lumen open
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1526 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; not artery, sections of nerve with trace and ~5% of external fat (outlined);
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1626 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; ~ 207um squamous epithelium with parakeratosis; 3 pieces contain submucosal glands (outlined)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1726 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis with attached serosa up to 3.5mm
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; gastric mucosa; 3 pieces contain target muscularis (outlined)
|
Unacceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-1926 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis present
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2026 |
Prostate
|
PAXgene |
1
|
2 pieces; mild to moderated autolysis; fibromuscular stroma and glandular componenet with corpora amylacea and sloughed glandular epithelium
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; hair bearing skin with ~ 15% of external/internal fat
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2426 |
Stomach
|
PAXgene |
1
|
6 pieces; mild to moderate autolysis of gastric mucosa; 3 sections contain muscularis (outlined)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2526 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces; essentially well trimmed although two pieces contain small fragments of fibrous tissue (outlined)
|
Acceptable
|
|
GTEX-1IDJD
|
21-40
|
Male
|
GTEX-1IDJD-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; mild to moderate mucosal autolysis; target muscularis preserved
|
Unacceptable
|
|
GTEX-1IDJE
|
51-60
|
Female
|
GTEX-1IDJE-0126 |
Spleen
|
PAXgene |
1
|
2 pieces; moderate congestion; capsule present
|
Acceptable
|
|