GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-2726 |
Ileum
|
PAXgene |
3
|
6 pieces, glandular mucosa autolyzed, ~20% residual target lymphoid aggregates
|
Acceptable
|
|
GTEX-1GN1U
|
51-60
|
Female
|
GTEX-1GN1U-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present; advanced tubular autolysis
|
Acceptable
|
|
GTEX-1GN1U
|
51-60
|
Female
|
GTEX-1GN1U-2626 |
Stomach
|
PAXgene |
3
|
6 pieces, mucosa up to ~0.5mm but advanced autolysis, partially sloughing
|
Acceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-1526 |
Pancreas
|
PAXgene |
3
|
2 pieces; ~50% internal and attached fat, some atrophy/fibrosis, saponification
|
Acceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2326 |
Stomach
|
PAXgene |
3
|
6 pieces; entirely autolyzed mucosa and muscularis
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2426 |
Ileum
|
PAXgene |
3
|
5 pieces; autolyzed, also includes muscularis (not target)
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2526 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; full thickness, autolyzed
|
Unacceptable
|
|
GTEX-1GN1V
|
61-70
|
Male
|
GTEX-1GN1V-2626 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; autolyzed muscularis
|
Unacceptable
|
|
GTEX-1GN1W
|
51-60
|
Female
|
GTEX-1GN1W-1826 |
Ileum
|
PAXgene |
3
|
5 pieces; excessive autolysis of lymphoid tissue; muscularis propria in 4 of 5 pieces
|
Unacceptable
|
|
GTEX-1GN2E
|
61-70
|
Male
|
GTEX-1GN2E-2326 |
Stomach
|
PAXgene |
3
|
6 pieces, viable muscularis only, mucosa completely sloughed
|
Acceptable
|
|
GTEX-1GN2E
|
61-70
|
Male
|
GTEX-1GN2E-2726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, tubule with advanced autolysis
|
Acceptable
|
|
GTEX-1GPI6
|
61-70
|
Male
|
GTEX-1GPI6-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-1GPI6
|
61-70
|
Male
|
GTEX-1GPI6-1826 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, tubular necrosis/autolysis is advanced
|
Acceptable
|
|
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-1626 |
Spleen
|
PAXgene |
3
|
2 pieces, marked congestion
|
Acceptable
|
|
GTEX-1GTWX
|
61-70
|
Male
|
GTEX-1GTWX-2426 |
Ileum
|
PAXgene |
3
|
6 pieces,; insufficient lymphoid aggregates for analysis in correct target
|
Unacceptable
|
|
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-1926 |
Ileum
|
PAXgene |
3
|
6 pieces; severe autolysis of mucosa, muscularis (not target) is better preserved, lack of target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2326 |
Pancreas
|
PAXgene |
3
|
2 pieces; moderate to severe parenchymal and fat autolysis, ~15% and 5% external fat (arrows), interstitial fibrosis, very rare islets (rep outlined)
|
Acceptable
|
|
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; autolyzed mucosa with a few scattered lymphoid aggregates (outlined) and trace of preserved muscularis (arrows), largely fat/submucosa
|
Unacceptable
|
|
GTEX-1GZ2Q
|
41-50
|
Male
|
GTEX-1GZ2Q-2826 |
Colon, sigmoid
|
PAXgene |
3
|
6 pieces; severely autolyzed mucosa and lack of muscularis
|
Unacceptable
|
|
GTEX-1GZHY
|
51-60
|
Female
|
GTEX-1GZHY-2126 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces, glomeruli present, tubules autolyzed
|
Acceptable
|
|
GTEX-1GZHY
|
51-60
|
Female
|
GTEX-1GZHY-2626 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, glandulare mucosa totally atuolyzed
|
Acceptable
|
|
GTEX-1GZHY
|
51-60
|
Female
|
GTEX-1GZHY-2826 |
Ileum
|
PAXgene |
3
|
6 pieces, ~20% residual target lymphoid aggregates, glandular elements autolyszed/sloughed
|
Acceptable
|
|
GTEX-1H1CY
|
61-70
|
Female
|
GTEX-1H1CY-1226 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces: 3 are cortex, 3 are medulla
|
Unacceptable
|
|
GTEX-1H1CY
|
61-70
|
Female
|
GTEX-1H1CY-1526 |
Stomach
|
PAXgene |
3
|
6 pieces; mucosa autolyzed or absent; muscularis intact
|
Unacceptable
|
|
GTEX-1H1CY
|
61-70
|
Female
|
GTEX-1H1CY-1626 |
Pancreas
|
PAXgene |
3
|
2 pieces; parenchyma autolyzed; 30% extraneous fat
|
Unacceptable
|
|