GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1026 |
Testis
|
PAXgene |
1
|
2 pieces, sprematogenesis is present
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1126 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; squamous mucosa is ~10% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1226 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis; focal stromal connective tissue
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis, focal connective tissue
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, well- preserved mucosa is ~1mm, ~25% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1526 |
Colon, sigmoid
|
PAXgene |
1
|
4 pieces, mainly muscularis; trace 'contaminant' mucosa, delineated
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1626 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well preserved mucosa is ~0.4mm thick, ~15% thickness
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1726 |
Ileum
|
PAXgene |
1
|
6 pieces, unusually abundant and well preserved lymphoid aggregates are ~50% total specimen.
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1826 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, good clean specimens, minimal adherent fat
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-1926 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, clean specimens, no adherent fat
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-2026 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, minimal interstitial fat
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-2126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, no abnormalities, ~15% fascia/fibrous tissue
|
Acceptable
|
|
GTEX-11NSD
|
21-40
|
Male
|
GTEX-11NSD-2226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, no dermal fat; squamous epithelium is ~50 microns
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces, include internal and attached adipose tissue up to 40%, squamous epithelium measures ~40 microns
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0226 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces, includes portion of nerve and small fragment of skeletal muscle
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, includes 10 and 30% attached fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, some intimal thickening, 1.1mm attachment of fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0626 |
Heart
|
PAXgene |
1
|
2 pieces, some attached and internal fat (<10%) and interstitial and patchy fibrosis
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0726 |
Aorta
|
PAXgene |
0
|
6 pieces, intimal thickening, attached adventitia with fat, nerve, and focal collection of lymphocytes
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0826 |
Lung
|
PAXgene |
1
|
2 pieces, includes pleura (target is 1 cm below pleura), numerous hemosiderin-laden macrophages, some congestion
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-0926 |
Atrial appendage
|
PAXgene |
0
|
2 pieces, one piece is ~20% fat, 2nd ~5% fat
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1026 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, thyroid with moderate autolysis, not testis
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1226 |
Liver
|
PAXgene |
1
|
2 pieces, includes capsule (target is 1 cm below capsule), few collections of lymphocytes, often in portal tracts
|
Acceptable
|
|
GTEX-11NUK
|
51-60
|
Male
|
GTEX-11NUK-1326 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, epithelium partially sloughing, some submucosal glands
|
Acceptable
|
|