GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces ~3.5mm d, severely calcified, atherosclerotic, subtotally occluded, aliquots are shattered
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-0926 |
Heart
|
PAXgene |
1
|
2 pieces ~7x6mm. Minimal interstitial fibrosis
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1026 |
Lung
|
PAXgene |
3
|
2 pieces ~7x6mm. Diffuse severe congestion/edema, badly autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1126 |
Aorta
|
PAXgene |
1
|
6 pieces ~8x1.5mm, several with up to 0.4mm atheromatous plaque, encircled
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1226 |
Liver
|
PAXgene |
2
|
2 pieces ~10x8mm. Moderate congestion, moderately autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1326 |
Spleen
|
PAXgene |
3
|
2 pieces ~8x6mm, severe red pulp congestion
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1426 |
Esophagus - mucosa
|
PAXgene |
3
|
6 pieces ~6x1.5mm, squamous mucosa is badly autolyzed and sloughing
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1526 |
Esophagus - muscularis
|
PAXgene |
2
|
6 pieces ~6x3mm
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1626 |
Adrenal glands
|
PAXgene |
3
|
2 pieces ~14x3mm. Fat is 10-40% of specimens, encircled
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1726 |
Kidney - cortex
|
PAXgene |
3
|
6 pieces ~7x3mm. Tubules badly autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1826 |
Kidney - medulla
|
PAXgene |
3
|
2 pieces ~10x8mm, LDACC NOTE: ~35-40%% of one aliquot is cortex, ensquared
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-1926 |
Testis
|
PAXgene |
3
|
2 pieces, 8x6mm. Spermatogenesis is present but badly autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2026 |
Prostate
|
PAXgene |
3
|
2 pieces ~8x7mm. Pattern of glandular hyperplasia but mucosa severely autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2126 |
Urinary bladder
|
PAXgene |
3
|
6 pieces ~8x4mm; urothelium completely sloughed, half the pieces have layer of fat up to 50% of total thickness of specimen; representative fatty areas encircled
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2226 |
Colon, transverse
|
PAXgene |
3
|
6 pieces ~8x2mm, mucosa badly autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2326 |
Stomach
|
PAXgene |
3
|
6 pieces ~8x1.5mm, mucosa up to 50% thickness of some pieces but all badly autolyzed
|
Acceptable
|
|
GTEX-SJXC
|
61-70
|
Male
|
GTEX-SJXC-2426 |
Pancreas
|
PAXgene |
3
|
2 pieces ~8x6mm, severely autolyzed/saponified. LDACC NOTE: ~80% of one aliquot is fat, encircled
|
Acceptable
|
|
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0126 |
Skin, leg
|
PAXgene |
0
|
5 pieces + one fragment, ~8x2mm. Squamous epithelium is ~2-3% of thickness.
|
Acceptable
|
|
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces ~10 x 10mm. One with extreme separation but seems well preserved.
|
Acceptable
|
|
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces ~8x7mm. Prominent band of scarring/fibrosis encircled, largest confluent focus ~1.5x1mm in one aliquot, ~15 % of specimen
|
Acceptable
|
|
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces ~4mm d. Rim of fibrous tissue 0.5 --1mm around larger aliquot
|
Acceptable
|
|
GTEX-SSA3
|
61-70
|
Male
|
GTEX-SSA3-0526 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces ~4.5mm d. Discontinuous rims of adherent fat around both ~0.5--1.5mm thick, representative foci encircled.
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0126 |
Spleen
|
PAXgene |
1
|
2 pieces 6x6 & 8x6 mm; mild congestion
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0226 |
Thyroid gland
|
PAXgene |
1
|
2 pieces 9x5 & 7x4 mm;
|
Acceptable
|
|
GTEX-SUCS
|
61-70
|
Male
|
GTEX-SUCS-0326 |
Heart
|
PAXgene |
1
|
2 pieces 8x6 & 7x7 mm; contraction bands; no fibrosis or fat
|
Acceptable
|
|