GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, mainly fibroadipose elements; a few ductal elements, rep delinetaed; focal gynecomastoid hyperplasia
|
Acceptable
|
|
GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-2626 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; trace "contaminant" autolyzed mucosa; rep. delineated
|
Acceptable
|
|
GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-2926 |
Pituitary gland
|
PAXgene |
1
|
1 piece; mainly adenohypophysis; ~3.5mm nodule of neurohypophysis, delineated
|
Acceptable
|
|
GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-3026 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1I1GV
|
61-70
|
Male
|
GTEX-1I1GV-3126 |
Brain - cortex
|
PAXgene |
1
|
3 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0126 |
Skin, leg
|
PAXgene |
1
|
6 pieces; includes from 5-15% internal fat, epidermis measures 33 microns, solar elastosis
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0226 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; 25 and 70% fat, remainder is fibrous/vascular/nerve
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0326 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; skeletal muscle with 10 and 15% fat
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0426 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces; nerve with minimal attachment of fat
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0526 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed, mild intimal thickening/plaque
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0626 |
Atrial appendage
|
PAXgene |
1
|
2 pieces; includes ~10% internal fat
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0726 |
Heart
|
PAXgene |
1
|
2 pieces; both include ~10% attached fat, small amount of internal/perivascular fat, patchy areas of scar in one piece
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0826 |
Coronary artery
|
PAXgene |
1
|
2 pieces; atherosclerosis with focal calcification and significant narrowing of the lumen
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-0926 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosclerosis
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1026 |
Omentum
|
PAXgene |
1
|
2 pieces; lobulated mature fat, some central defects (?poor fixation)
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1126 |
Liver
|
PAXgene |
1
|
2 pieces; congestion, bridging fibrosis/early cirrhosis, patchy mild chronic inflammation
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1226 |
Lung
|
PAXgene |
1
|
2 pieces; includes pleura (target is 1cm below pleura), congestion, many macrophages
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1426 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; fat/fibrous tissue/nerve/vessels, not muscularis
|
Unacceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; submucosa, muscularis mucosae vs propria, no significant intact epithelium
|
Unacceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2226 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present, rare hyalinized tubules
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2326 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces; include up to 50% attached fat, incomplete sections (?poor fixation)
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2426 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; minimal fat with several ducts, some gynecomastoid features
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2526 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; good representation of salivary gland elements with some admixed fat and small portion of attached stroma/nerve/vessels, chronic sialadenitis
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2726 |
Brain - cerebellum
|
PAXgene |
1
|
2 pieces (fragmented), mild to moderate autolysis, purkinje cells well visualized, significant attachment of meninges
|
Acceptable
|
|
GTEX-1I1HK
|
61-70
|
Male
|
GTEX-1I1HK-2826 |
Brain - cortex
|
PAXgene |
1
|
2 pieces; more white matter than usual
|
Acceptable
|
|