GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1426 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~0.5mm, ~50-60% thickness.
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1626 |
Stomach
|
PAXgene |
2
|
6 pieces, target mucosa up to ~1mm, ~30-40% thickness; deeper (basal)mucosa better preserved (score 1)
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1726 |
Testis
|
PAXgene |
1
|
2 pieces, spermatogenesis appears reduced.
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1826 |
Prostate
|
PAXgene |
1
|
2 pieces, hyperplastic glandular pattern
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-1926 |
Skin, leg
|
PAXgene |
0
|
6 pieces trace dermal fat (delineated); squamous epithelium is ~40-50 microns
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2026 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, fascia/vascular elements are ~10-20% of tissue (rep delineated)
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, interstitial fat/vascular elements are 10-15% of tissue
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2226 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces, minute nubbins of adherent fat
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2326 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, rim of adherent fascia up to ~1mm; no atherosis
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2426 |
Kidney - cortex
|
PAXgene |
1
|
6 pieces, glomeruli present; tubules mildy autolyzed
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, confirmed target muscularis; focal trace mucosa, delineated
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2626 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, prominent gynecomastoid ductal (rep encircled) and stromal hyperplasia
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2726 |
Ileum
|
PAXgene |
1
|
6 pieces, abundant lymphoid aggregates are ~60-70% of tissue
|
Acceptable
|
 |
GTEX-1GMR3
|
21-40
|
Male
|
GTEX-1GMR3-2826 |
Colon, transverse
|
PAXgene |
2
|
6 pieces, target mucosa is ~0.5mm, ~20% thickness; deeper (basal) mucosa better preserved (score 1)
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0126 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace dermal fat; rep delineated; squamous epithelium is ~40 microns
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~10% fascia, rep. delineated
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~5-10% interstitial fat; rep. delineated
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0426 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces trace nubbin of fat up to ~0.5mm
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0526 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, no significant atherosis or adherent fat; prominent Monkeberg medial sclerosis, rep. delineated
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0626 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis is present, appears slightly reduced
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0726 |
Omentum
|
PAXgene |
1
|
2 pieces, trace fascia/vascular elements (<5%)
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, focal gynecomastoid stromal (delineated) and ductal (encircled) hyperplasia
|
Acceptable
|
 |
GTEX-1GMRU
|
51-60
|
Male
|
GTEX-1GMRU-0926 |
Liver
|
PAXgene |
1
|
2 pieces, diffuse macrovesicular steatosis involves ~80% of parenchyma
|
Acceptable
|
 |