GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-1626 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces; 2 pieces have [4 mm] squamous epithelium [ NOT target]; muscle present in all 6
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-1726 |
Stomach
|
PAXgene |
3
|
6 pieces; only small groups of glands are preserved [annotated]; of limited value
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-1826 |
Ileum
|
PAXgene |
1
|
6 pieces; abundant lymphoid tissue in 5 of 6 pieces
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-1926 |
Colon, transverse
|
PAXgene |
1
|
6 pieces; well preserved mucosa and full thickness wall in all; up to 2 mm pericolonic fat
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2026 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; all with full thickness muscle; 3 have mucosal components [NOT target; annotated]
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2126 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces; some gynecomastoid hyperplasia (fibrosis and ducts)
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2226 |
Testis
|
PAXgene |
1
|
2 pieces; spermatogenesis
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2326 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; large central hole (unfixed)
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2426 |
Skin, leg
|
PAXgene |
0
|
6 pieces; well trimmed
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces; up to 20% internal fat
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2626 |
Nerve - tibial
|
PAXgene |
1
|
4 pieces; up to 30% internal and external fat
|
Acceptable
|
|
GTEX-ZVZP
|
51-60
|
Male
|
GTEX-ZVZP-2726 |
Artery - tibial
|
PAXgene |
1
|
4 pieces; all heavily calcified medially; no luminal plaques; up to 1 mm external fat
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0126 |
Testis
|
PAXgene |
1
|
2 pieces, active spermatogenesis
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0226 |
Skin, leg
|
PAXgene |
1
|
6 pieces, predominantly well trimmed, up to 10% internal and attached fat, squamous epithelium measures 30-40 microns thick
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0326 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, one piece includes ~40% fibrous tissue, hair follicles, vessels, sweat glands
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0426 |
Skin, suprapubic
|
PAXgene |
1
|
6 pieces, predominantly well trimmed, 3 include 5-10% fat
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0526 |
Muscle, skeletal
|
PAXgene |
1
|
2 pieces, includes ~10% fat and vascular tissue
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0626 |
Nerve - tibial
|
PAXgene |
1
|
2 pieces, one piece includes rim of attached fat (~40%), second piece is only ~5% nerve (predominantly fat and vessels), central hole
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0726 |
Artery - tibial
|
PAXgene |
1
|
2 pieces, atherosclerosis
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0826 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, one piece is fat with scant fibrous stroma and few central holes, second includes ~10% fibrous stroma with few ducts, epithelium sloughed
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-0926 |
Thyroid gland
|
PAXgene |
2
|
2 pieces, one piece is ~10% fibrovascular and adipose tissue
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-1026 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, large central defects in both pieces
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-1126 |
Heart
|
PAXgene |
1
|
2 pieces, myocyte hypertrophy
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-1226 |
Coronary artery
|
PAXgene |
1
|
2 pieces, both with rim of attached fat, nerve, and cardiac muscle comprising 30-70% of the specimens
|
Acceptable
|
|
GTEX-ZYFC
|
51-60
|
Male
|
GTEX-ZYFC-1326 |
Lung
|
PAXgene |
2
|
2 pieces, congestion, intra-alveolar hemorrhage, and sloughing of bronchial epithelium
|
Acceptable
|
|