GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0226 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0326 |
Aorta
|
PAXgene |
1
|
6 pieces, minimal atherosis
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0426 |
Spleen
|
PAXgene |
1
|
2 pieces, no abnormalities
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0526 |
Coronary artery
|
PAXgene |
1
|
2 pieces, mainly fat/myocardium, minute vessel, not sufficient for GTEx use
|
Unacceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0626 |
Heart
|
PAXgene |
1
|
2 pieces, minimal ischemic damage
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0726 |
Thyroid gland
|
PAXgene |
1
|
2 pieces, few small lymphoid aggregates, not sufficient for Hashimotos, but may be early stage condition.
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0826 |
Lung
|
PAXgene |
1
|
2 pieces, mild congestion
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-0926 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa is ~10% thickness
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1026 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1126 |
Pancreas
|
PAXgene |
1
|
2 pieces ~20% interstitial fat delineated; Islets well-visualized, rep encircled
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1226 |
Omentum
|
PAXgene |
1
|
2 pieces, minimal fibrosis
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, all muscularis
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1426 |
Stomach
|
PAXgene |
1
|
6 pieces, fairly well preserved mucosa, ~10-15% thickness, superficial areas approach 'score 2' focally
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1526 |
Skin, suprapubic
|
PAXgene |
0
|
6 pieces, minimal dermal fat, squamous epithelium is ~50 microns
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1626 |
Ileum
|
PAXgene |
1
|
6 pieces, all colon, unknown site, not GTEx target
|
Unacceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1726 |
Colon, transverse
|
PAXgene |
1
|
6 pieces, well preserved mucosa
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1826 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, all muscularis/adherent fat/serosa, rep delineated
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-1926 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, mild fibrocystic change, rep ductal cysts delineated
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-2026 |
Skin, leg
|
PAXgene |
0
|
6 pieces, minimal dermal fat; squamous epithelium is ~40 microns
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-2126 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, ~10% interstitial fat, rep delineated
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-2226 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, ~40% intermingled fascia/fibrous tissue, delineated
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-2326 |
Nerve - tibial
|
PAXgene |
0
|
2 pieces clean, minute nubbin of fat, delineated
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-2426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, minimal circumferential fibrous tissue up to ~0.3mm, good specimens
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-5001 |
Heart
|
Dry Ice |
|
1 piece correlates with PGT-fixed aliquot
|
Acceptable
|
|
GTEX-1211K
|
61-70
|
Female
|
GTEX-1211K-5004 |
Lung
|
Dry Ice |
|
1 piece correlates with PGT-fixed aliquot
|
Acceptable
|
|