GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1026 |
Ileum
|
PAXgene |
1
|
6 pieces anatomic correct organ, only trace target lymphoid aggregates
|
Unacceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1126 |
Omentum
|
PAXgene |
1
|
2 pieces, ~10-15% fascia/vascular elements; rep delineated
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1326 |
Lung
|
PAXgene |
1
|
2 pieces, minimal congestion
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1426 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces, ~60% target muscularis (rep delineated); rest is adherent sersoal fat/connective tissue elements, focal mucosa
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1726 |
Prostate
|
PAXgene |
1
|
2 pieces, glandular hyperplastic pattern
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
6 pieces, confirmed target muscularis
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-1926 |
Minor salivary glands
|
PAXgene |
1
|
3 pieces, >95% glandular elements; excellent specimen
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2026 |
Testis
|
PAXgene |
1
|
2 pieces, dense hyaline tissue, trace seminiferous tubules/Leydig cells, suspect fibrotic process, insufficient target tissue
|
Unacceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2126 |
Stomach
|
PAXgene |
1
|
6 pieces, approaches score "2" in pfoci; mucosa up to ~0.7mm, ~25-30% thickness
|
Acceptable
|
|
GTEX-1HSMP
|
61-70
|
Male
|
GTEX-1HSMP-2226 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, fibroadipose elements only
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0126 |
Spleen
|
PAXgene |
1
|
2 pieces
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0326 |
Aorta
|
PAXgene |
1
|
6 pieces; atherosclerosis
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0526 |
Thyroid gland
|
PAXgene |
1
|
2 pieces; mild interstitial fibrosis, ~10% is fat/fibrous/vessels
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0626 |
Coronary artery
|
PAXgene |
1
|
2 pieces; fragment of arterial wall with atherosclerosis
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0826 |
Pancreas
|
PAXgene |
1
|
2 pieces; includes minimal fat, islets are well visualized
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-0926 |
Minor salivary glands
|
PAXgene |
1
|
2 pieces; well trimmed, salivary gland elements with small component of internal fat
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-1226 |
Skin, leg
|
PAXgene |
1
|
6 pieces; essentially well trimmed, but with up to 10% periadnexal fat, epidermis measures 34 microns
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-1426 |
Adipose tissue
|
PAXgene |
1
|
2 pieces; fat with 10-20% fibrous tissue
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-1626 |
Artery - tibial
|
PAXgene |
1
|
2 pieces; well trimmed, some intimal thickening, mild plaque
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2026 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces; includes several clusters of submucosal glands
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2126 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces; target muscularis
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2226 |
Ileum
|
PAXgene |
1
|
6 pieces; mucosa and submucosa with good lymphoid component
|
Acceptable
|
|
GTEX-1HSMQ
|
51-60
|
Male
|
GTEX-1HSMQ-2526 |
Colon, sigmoid
|
PAXgene |
1
|
6 pieces; predominantly muscularis, several pieces include strips of residual mucosa
|
Acceptable
|
|