GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1126 |
Atrial appendage
|
PAXgene |
1
|
2 pieces, one is ~40% fat, rep foci delineated
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1226 |
Aorta
|
PAXgene |
1
|
6 pieces, some with adherent serosa ~0.5mm
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1326 |
Mammary tissue (breast)
|
PAXgene |
1
|
2 pieces, involuted TDLUs noted, rep ones delineated. Fibrocystic changes
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1426 |
Omentum
|
PAXgene |
1
|
2 pieces ~10% interstitial vessels
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1526 |
Esophagus - mucosa
|
PAXgene |
1
|
6 pieces, squamous mucosa ~ 40-75% thickness
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1626 |
Esophagus - muscularis
|
PAXgene |
1
|
6 pieces, all muscularis, minimal fat
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1726 |
Liver
|
PAXgene |
1
|
2 pieces, some foci more autolyzed, approach score 2; minimal steatosis
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1826 |
Gastroesophageal junction
|
PAXgene |
1
|
2 pieces, all muscularis
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-1926 |
Stomach
|
PAXgene |
2
|
6 pieces, mucosa moderately autolyzed, 40-60% thickness
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2026 |
Spleen
|
PAXgene |
2
|
2 pieces, moderate congestion
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2126 |
Adrenal glands
|
PAXgene |
2
|
2 pieces, all cortex
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2226 |
Kidney - cortex
|
PAXgene |
2
|
6 pieces, all have glomeruli
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2326 |
Pancreas
|
PAXgene |
2
|
2 pieces, moderate-marked saponification/autolysis; islets still well visualized; rep ones delineated
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2426 |
Vagina
|
PAXgene |
2
|
6 pieces; squamous mucosa beginning to slough, ~0.1mm thick, 2-3% thickness
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2526 |
Uterus
|
PAXgene |
1
|
2 pieces, myometrium, no viable endometrium noted
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2626 |
Ileum
|
PAXgene |
3
|
4 pieces, mucosa totally autolyzed; ~5-10% specimen is lymphoid aggregates, rep foci delineated
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2726 |
Colon, transverse
|
PAXgene |
3
|
6 pieces; mucosa ~10-40% thickness but totally autolyzed/sloughing
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2826 |
Colon, sigmoid
|
PAXgene |
2
|
6 pieces, ~10% adherent serosa, ~90% muscularis, unusually poorly preserved
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-2926 |
Brain - cerebellum
|
PAXgene |
1
|
4 pieces, Purkinje cells show minimal ischemic damage
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-3026 |
Brain - cortex
|
PAXgene |
1
|
4 pieces
|
Acceptable
|
|
GTEX-ZAK1
|
51-60
|
Female
|
GTEX-ZAK1-3126 |
Pituitary gland
|
PAXgene |
1
|
1 piece, ~50% neurohypophysis, delineated; rest adenohypophysis
|
Acceptable
|
|
GTEX-ZC5H
|
41-50
|
Female
|
GTEX-ZC5H-0126 |
Adipose tissue
|
PAXgene |
0
|
2 pieces, minimal fibrous tissue
|
Acceptable
|
|
GTEX-ZC5H
|
41-50
|
Female
|
GTEX-ZC5H-0226 |
Skin, leg
|
PAXgene |
0
|
6 pieces, trace fat (~0.5mm) on a few sections. Squamous epithelium is ~50-60 microns thick
|
Acceptable
|
|
GTEX-ZC5H
|
41-50
|
Female
|
GTEX-ZC5H-0326 |
Muscle, skeletal
|
PAXgene |
0
|
2 pieces, <1% interstitial fat; trace adherent fat, delineated
|
Acceptable
|
|
GTEX-ZC5H
|
41-50
|
Female
|
GTEX-ZC5H-0426 |
Artery - tibial
|
PAXgene |
0
|
2 pieces, circumferential adherent fibrous tissue ~0.5mm
|
Acceptable
|
|