GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-1926 |
Colon, transverse
|
PAXgene |
3
|
6 pieces, mucosa totally autolyzed
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2126 |
Ileum
|
PAXgene |
3
|
5 pieces, mucosa totally sloughed, residual lymphoid aggregates are ~15% total tissue (delineated)
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2226 |
Minor salivary glands
|
PAXgene |
2
|
1 piece + minute fragement. ~40% glandular tissue (delineated), rest is fibrotic + adipose tissue
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2326 |
Brain - cerebellum
|
PAXgene |
2
|
2 pieces, unusually poorly preserved cerebellum switched with 2425
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2426 |
Brain - cortex
|
PAXgene |
2
|
2 pieces; poorly preserved cerebral cortex; switched with 2325
|
Acceptable
|
|
GTEX-ZV68
|
51-60
|
Female
|
GTEX-ZV68-2526 |
Pituitary gland
|
PAXgene |
3
|
2 pieces (ensquared) gland + 1 piece dura. ~40% neurohypophysis (delineated), rest adenohypophysis, but badly autolyzed
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0126 |
Thyroid gland
|
PAXgene |
1
|
1 piece, regressive changes and prominent vessels, delineated
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0226 |
Aorta
|
PAXgene |
1
|
3 pieces, patchy atherosis up to ~0.3mm
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0326 |
Heart
|
PAXgene |
1
|
1 piece, remote (delineated) and subacute ischemic changes with focal healed infarct
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0426 |
Coronary artery
|
PAXgene |
1
|
1 piece, ~20% occlusive atherosis
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0526 |
Atrial appendage
|
PAXgene |
1
|
1 piece, unremarkalble
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0626 |
Spleen
|
PAXgene |
1
|
1 piece, moderate congestion
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0726 |
Pancreas
|
PAXgene |
1
|
1 piece, well preserved, Islets well seen (rep delineated), small amounts adherent fat, highlighted; patchy fibrosis suggests remote pancreatitis.
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0826 |
Omentum
|
PAXgene |
1
|
1 piece, minute additional fragment. No significant fibrosis/vessels
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-0926 |
Skin, suprapubic
|
PAXgene |
0
|
3 pieces, minimal fat, squamous epithelium is ~60microns thick
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1026 |
Adrenal glands
|
PAXgene |
1
|
1 piece (fragmented), prominent medulla is ~50% of specimen (rep area delineated), rest cortex,
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1126 |
Esophagus - muscularis
|
PAXgene |
1
|
3 pieces, all muscularis, trace adherent serosa, good specimens
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1226 |
Esophagus - mucosa
|
PAXgene |
1
|
3 pieces, essentially all gastric cardia, minute focus squamous mucosa delineated. Not part of GTEx
|
Unacceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1326 |
Gastroesophageal junction
|
PAXgene |
1
|
3 pieces, all muscularis
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1426 |
Ileum
|
PAXgene |
1
|
3 pieces, excellent specimen; well preserved with Peyer patches ~50% of specimen, rep areas delineated
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1526 |
Colon, transverse
|
PAXgene |
1
|
3 pieces; mucosa beautifully preserved, ~10-15% thickness, excellent specimen
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1626 |
Stomach
|
PAXgene |
1
|
3 pieces, excellent specimen, well preserved mucosa is ~50% thickness, ave 1mm
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1726 |
Colon, sigmoid
|
PAXgene |
1
|
3 pieces, all muscularis, good specimens
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1826 |
Mammary tissue (breast)
|
PAXgene |
1
|
1 piece, trace ductal elements (rep. delineated) glandular and stromal gynecomastoid hyperplasia
|
Acceptable
|
|
GTEX-ZV7C
|
51-60
|
Male
|
GTEX-ZV7C-1926 |
Prostate
|
PAXgene |
1
|
1 piece. Diffuse high grade adenocarcinoma (Gleason sum score 5+4=9). Cannot be used for GTEx
|
Unacceptable
|
|